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PDBsum entry 5g4r

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protein ligands Protein-protein interface(s) links
Transcription PDB id
5g4r

 

 

 

 

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Contents
Protein chains
109 a.a.
Ligands
LF1 ×4
Waters ×400
PDB id:
5g4r
Name: Transcription
Title: Bromodomain of human brpf1 with n-1,3-dimethyl-6-2r-2- methylpiperazin-1-yl-2-oxo-2,3-dihydro-1h-1,3-benzodiazol-5-yl-2- methoxybenzamide
Structure: Peregrin. Chain: a, b, c, d. Fragment: bromodomain of brpf1, unp residues 622-738. Synonym: bromodomain and phd finger-containing protein 1, protein br140,. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
1.96Å     R-factor:   0.202     R-free:   0.240
Authors: C.Chung
Key ref: P.Bamborough et al. (2016). GSK6853, a Chemical Probe for Inhibition of the BRPF1 Bromodomain. Acs Med Chem Lett, 7, 552-557. PubMed id: 27326325 DOI: 10.1021/acsmedchemlett.6b00092
Date:
16-May-16     Release date:   06-Jul-16    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P55201  (BRPF1_HUMAN) -  Peregrin from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1214 a.a.
109 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.?
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

 

 
DOI no: 10.1021/acsmedchemlett.6b00092 Acs Med Chem Lett 7:552-557 (2016)
PubMed id: 27326325  
 
 
GSK6853, a Chemical Probe for Inhibition of the BRPF1 Bromodomain.
P.Bamborough, H.A.Barnett, I.Becher, M.J.Bird, C.W.Chung, P.D.Craggs, E.H.Demont, H.Diallo, D.J.Fallon, L.J.Gordon, P.Grandi, C.I.Hobbs, E.Hooper-Greenhill, E.J.Jones, R.P.Law, A.Le Gall, D.Lugo, A.M.Michon, D.J.Mitchell, R.K.Prinjha, R.J.Sheppard, A.J.Watson, R.J.Watson.
 
  ABSTRACT  
 
The BRPF (Bromodomain and PHD Finger-containing) protein family are important scaffolding proteins for assembly of MYST histone acetyltransferase complexes. A selective benzimidazolone BRPF1 inhibitor showing micromolar activity in a cellular target engagement assay was recently described. Herein, we report the optimization of this series leading to the identification of a superior BRPF1 inhibitor suitable for in vivo studies.
 

 

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