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PDBsum entry 5ftt

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Pore analysis for: 5ftt calculated with MOLE 2.0 PDB id
5ftt
Pores calculated on whole structure Pores calculated excluding ligands

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27 pores, coloured by radius 22 pores, coloured by radius 22 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.25 2.47 25.8 -0.86 -0.25 14.0 76 3 2 1 3 0 5 0  
2 1.48 3.41 33.0 -2.06 -0.34 20.4 80 4 2 3 2 2 1 0  
3 1.52 1.52 33.2 -1.57 -0.25 11.3 75 2 3 3 0 3 0 1  
4 1.91 1.91 39.0 -1.64 -0.52 18.8 88 4 3 4 4 1 0 0  
5 1.60 2.95 46.2 -1.44 -0.19 16.6 80 5 4 6 3 3 1 0  
6 1.30 2.45 47.8 -1.57 -0.56 13.1 89 2 3 11 2 2 0 1  
7 2.15 2.17 52.9 -2.04 -0.41 24.8 82 6 5 6 3 2 2 0  NAG 1465 C
8 1.25 2.42 70.8 -1.39 -0.58 12.7 93 3 4 13 5 2 0 0  
9 1.62 2.78 71.3 -1.77 -0.35 21.9 76 6 7 9 2 5 2 0  
10 1.31 2.47 76.5 -1.67 -0.38 17.6 80 8 8 9 2 5 2 1  
11 1.37 2.64 79.8 -1.63 -0.37 17.5 77 5 7 11 2 6 2 1  
12 1.42 1.51 81.3 -1.76 -0.32 19.5 80 7 7 7 3 5 1 0  NAG 1465 C
13 1.58 1.61 94.5 -2.30 -0.45 26.3 81 10 10 6 3 5 2 0  NAG 1465 C
14 1.47 1.55 96.5 -1.08 -0.42 19.7 83 6 10 5 7 3 1 0  
15 1.37 2.33 104.2 -1.60 -0.38 18.2 81 10 6 8 5 3 5 1  
16 2.09 2.09 134.5 -1.38 -0.41 18.9 83 9 10 13 10 2 4 1  NAG 1465 G
17 1.29 2.34 130.8 -1.11 -0.12 20.2 82 7 8 9 12 4 1 2  NAG 1465 G
18 1.33 2.27 138.2 -1.23 -0.30 19.2 79 11 11 5 10 6 5 1  
19 1.50 1.52 165.0 -1.26 -0.37 20.2 81 10 15 10 15 5 4 1  NAG 1465 G
20 1.57 1.75 221.6 -1.55 -0.48 18.7 83 12 9 10 7 5 4 0  
21 1.50 1.63 309.3 -1.77 -0.48 21.2 82 19 17 17 11 4 5 0  
22 1.16 1.46 276.6 -1.69 -0.46 19.6 83 14 13 18 9 5 3 0  NAG 1465 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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