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PDBsum entry 5fo8

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Pore analysis for: 5fo8 calculated with MOLE 2.0 PDB id
5fo8
Pores calculated on whole structure Pores calculated excluding ligands

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17 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.49 1.53 56.9 -1.94 -0.37 26.4 72 10 10 1 5 3 5 0  EDO 2670 B
2 2.32 5.44 71.0 -1.23 -0.23 19.7 80 9 6 8 7 4 5 0  
3 1.21 1.45 88.7 -1.92 -0.49 22.9 81 11 13 9 7 2 1 0  
4 1.29 1.55 101.2 -2.26 -0.51 25.7 82 8 7 6 5 2 2 0  
5 1.99 3.29 102.4 -1.88 -0.39 27.7 78 11 11 5 8 4 5 0  EDO 2671 B
6 1.96 3.26 103.3 -1.92 -0.54 26.0 82 12 11 8 10 1 2 0  EDO 2671 B
7 1.47 1.51 108.3 -1.75 -0.41 23.6 78 14 13 9 9 5 4 0  EDO 2670 B
8 3.04 3.34 115.0 -1.95 -0.45 19.2 79 7 7 8 4 2 5 0  
9 2.01 2.02 131.4 -1.80 -0.51 24.8 81 11 14 11 10 2 2 0  
10 2.64 3.75 132.2 -1.50 -0.34 16.8 79 10 7 11 8 4 4 0  
11 1.30 2.62 134.0 -2.04 -0.42 24.2 83 8 7 9 4 1 3 0  
12 1.93 1.93 171.3 -2.08 -0.54 27.3 79 17 19 11 9 5 6 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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