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PDBsum entry 5fmf
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Tunnel analysis for: 5fmf calculated with  MOLE 2.0
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PDB id
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5fmf
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.18 |
1.45 |
25.6 |
1.40 |
0.40 |
6.1 |
87 |
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2 |
0 |
0 |
7 |
1 |
0 |
0 |
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2 |
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1.19 |
1.47 |
29.1 |
0.99 |
0.18 |
6.7 |
85 |
3 |
1 |
0 |
5 |
1 |
0 |
0 |
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3 |
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1.32 |
1.74 |
22.2 |
-0.13 |
0.00 |
15.7 |
79 |
3 |
3 |
2 |
6 |
3 |
0 |
0 |
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4 |
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1.45 |
1.45 |
28.5 |
-0.67 |
0.14 |
10.5 |
79 |
2 |
1 |
1 |
4 |
1 |
1 |
0 |
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5 |
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1.26 |
1.26 |
15.5 |
-0.48 |
-0.16 |
11.8 |
85 |
2 |
0 |
2 |
2 |
1 |
0 |
0 |
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6 |
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1.20 |
2.84 |
15.4 |
1.81 |
0.83 |
5.6 |
81 |
1 |
1 |
0 |
4 |
2 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program