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PDBsum entry 5fm7

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 5fm7 calculated with MOLE 2.0 PDB id
5fm7
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.28 1.45 28.9 -0.70 -0.36 9.5 76 2 2 1 1 2 2 0  
2 1.30 1.30 33.9 -1.69 -0.64 18.7 87 3 2 3 2 0 1 0  
3 1.02 2.05 34.8 0.42 0.26 11.9 84 3 3 0 5 1 0 0  
4 1.34 1.34 45.5 -1.07 -0.50 13.7 80 4 3 3 2 2 2 0  
5 1.38 1.50 89.2 -0.92 -0.30 16.6 88 9 5 4 11 0 3 0  ADP 501 B
6 1.81 2.22 91.9 -1.81 -0.64 21.5 81 7 8 5 8 0 2 0  ADP 501 B
7 1.75 1.74 115.1 -1.76 -0.57 21.7 82 11 11 5 10 1 3 0  ADP 501 B
8 1.40 1.48 118.5 -1.13 -0.38 20.8 84 11 6 5 14 0 1 0  
9 1.72 1.74 143.8 -1.64 -0.52 23.0 80 13 11 6 11 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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