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PDBsum entry 5fm7
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Pore analysis for: 5fm7 calculated with MOLE 2.0
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PDB id
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5fm7
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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9 pores,
coloured by radius |
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9 pores,
coloured by radius
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9 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.28 |
1.45 |
28.9 |
-0.70 |
-0.36 |
9.5 |
76 |
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2 |
2 |
1 |
1 |
2 |
2 |
0 |
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2 |
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1.30 |
1.30 |
33.9 |
-1.69 |
-0.64 |
18.7 |
87 |
3 |
2 |
3 |
2 |
0 |
1 |
0 |
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3 |
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1.02 |
2.05 |
34.8 |
0.42 |
0.26 |
11.9 |
84 |
3 |
3 |
0 |
5 |
1 |
0 |
0 |
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4 |
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1.34 |
1.34 |
45.5 |
-1.07 |
-0.50 |
13.7 |
80 |
4 |
3 |
3 |
2 |
2 |
2 |
0 |
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5 |
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1.38 |
1.50 |
89.2 |
-0.92 |
-0.30 |
16.6 |
88 |
9 |
5 |
4 |
11 |
0 |
3 |
0 |
ADP 501 B
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6 |
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1.81 |
2.22 |
91.9 |
-1.81 |
-0.64 |
21.5 |
81 |
7 |
8 |
5 |
8 |
0 |
2 |
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ADP 501 B
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7 |
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1.75 |
1.74 |
115.1 |
-1.76 |
-0.57 |
21.7 |
82 |
11 |
11 |
5 |
10 |
1 |
3 |
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ADP 501 B
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8 |
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1.40 |
1.48 |
118.5 |
-1.13 |
-0.38 |
20.8 |
84 |
11 |
6 |
5 |
14 |
0 |
1 |
0 |
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9 |
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1.72 |
1.74 |
143.8 |
-1.64 |
-0.52 |
23.0 |
80 |
13 |
11 |
6 |
11 |
1 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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