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PDBsum entry 5fi4

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Pore analysis for: 5fi4 calculated with MOLE 2.0 PDB id
5fi4
Pores calculated on whole structure Pores calculated excluding ligands

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24 pores, coloured by radius 27 pores, coloured by radius 27 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.73 2.76 39.6 -1.76 -0.43 19.5 79 6 2 5 4 2 1 0  
2 2.47 3.94 39.6 -2.58 -0.43 30.3 73 7 8 4 1 3 2 0  
3 3.04 3.04 44.9 -2.83 -0.56 31.2 73 8 8 4 0 4 2 0  
4 2.26 3.55 49.0 -2.36 -0.32 26.3 84 6 7 6 1 1 3 1  
5 1.20 1.32 57.3 -2.03 -0.71 22.1 79 6 6 5 3 0 4 1  
6 1.19 1.32 59.5 -1.88 -0.61 21.3 80 8 5 5 4 2 2 1  GOL 1101 A
7 1.42 3.56 60.4 -2.52 -0.64 28.9 81 9 8 5 2 1 2 0  
8 1.43 3.62 62.6 -2.22 -0.49 27.1 81 11 7 5 3 3 1 0  GOL 1101 A
9 1.31 1.93 72.8 -1.15 -0.33 15.5 79 6 6 4 8 2 3 1  
10 1.20 1.31 73.6 -1.99 -0.58 25.6 81 10 10 4 5 1 2 2  
11 1.42 2.71 76.7 -2.39 -0.53 31.1 82 13 12 4 4 2 1 1  
12 1.48 1.80 79.5 -1.61 -0.33 21.2 82 7 6 7 7 3 2 0  
13 1.27 1.98 89.9 -1.11 -0.23 11.7 76 8 5 6 7 7 6 1  GOL 1101 A
14 1.27 1.93 90.4 -0.99 -0.18 23.5 80 7 6 2 10 1 0 1  
15 1.43 1.63 94.4 -1.97 -0.40 22.5 83 12 6 13 6 2 0 0  
16 1.27 1.98 100.5 -1.37 -0.22 18.9 77 10 11 3 6 4 6 2  
17 1.28 2.03 102.0 -1.55 -0.24 21.7 77 9 9 5 8 4 1 1  
18 1.58 1.60 111.0 -1.78 -0.44 22.7 84 11 5 11 7 2 1 0  
19 1.46 1.97 120.8 -1.75 -0.41 22.7 81 15 10 6 7 3 0 0  
20 1.26 1.99 126.7 -1.82 -0.36 23.7 80 13 8 9 7 3 1 1  
21 1.49 1.55 129.5 -1.28 -0.38 19.3 81 10 9 6 12 1 3 0  
22 1.42 1.59 132.1 -1.14 -0.23 17.6 80 9 5 8 9 4 1 0  
23 1.44 1.55 138.4 -2.11 -0.53 25.6 79 19 13 8 5 5 0 0  
24 1.27 1.99 147.7 -1.21 -0.12 18.9 76 11 8 6 9 5 1 1  
25 1.44 1.97 156.0 -2.27 -0.54 30.0 83 20 19 6 6 1 2 0  
26 1.45 1.61 170.4 -1.72 -0.47 22.0 83 14 12 9 8 4 1 0  
27 1.41 1.92 186.0 -1.79 -0.41 23.1 80 16 15 7 8 5 1 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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