PDBsum entry 5fgf Go to PDB code:  Tunnel analysis for: 5fgf calculated with MOLE 2.0 PDB id 5fgf Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 tunnels, coloured by tunnel radius 35 tunnels, coloured by tunnel radius 35 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.50 1.55 77.5 -0.60 -0.24 13.2 81 6 3 6 8 7 1 2  3BV 301 V MES 302 V 3BV 201 b 2 1.27 1.60 96.6 -0.53 -0.09 9.5 80 5 3 10 8 11 1 0  MES 302 V 3BV 201 b 3 1.37 1.51 103.8 -0.69 -0.14 9.2 81 5 3 11 8 11 1 0  MES 302 V 3BV 201 b 4 1.48 1.62 103.8 -1.05 -0.24 15.0 84 8 7 11 10 9 1 0  3BV 301 V MES 302 V 3BV 201 b 5 1.43 1.56 118.5 -1.24 -0.32 16.7 83 7 7 10 8 8 0 0  3BV 301 V MES 302 V 3BV 201 b 6 1.42 1.58 121.9 -1.14 -0.36 13.7 85 8 7 13 10 9 1 0  3BV 301 V MES 302 V 3BV 201 b 7 1.39 1.53 123.3 -1.33 -0.36 17.4 83 7 7 11 8 8 0 0  3BV 301 V MES 302 V 3BV 201 b 8 1.43 1.59 135.0 -2.05 -0.36 23.9 83 12 6 10 6 7 1 0  3BV 301 V MES 302 V 3BV 201 b 9 1.49 1.63 139.5 -1.46 -0.27 18.3 81 11 6 13 9 11 1 1  3BV 301 V MES 302 V 3BV 201 b 10 1.53 1.65 141.3 -1.72 -0.30 20.1 83 10 5 13 8 10 0 0  3BV 301 V MES 302 V 3BV 201 b 11 1.50 1.62 148.2 -1.89 -0.32 23.2 83 15 7 12 5 10 1 0  3BV 301 V MES 302 V 3BV 201 b 12 1.35 1.50 147.3 -1.81 -0.28 21.2 84 12 5 14 5 11 0 0  3BV 301 V MES 302 V 3BV 201 b 13 1.23 1.21 150.2 -1.18 -0.23 16.2 81 11 4 13 9 10 1 0  3BV 301 V MES 302 V 3BV 201 b 14 1.50 1.63 147.9 -1.83 -0.37 20.6 85 11 8 14 6 8 0 0  3BV 301 V MES 302 V 3BV 201 b 15 1.20 1.53 152.5 -1.20 -0.24 16.3 81 12 5 12 10 9 1 0  3BV 301 V MES 302 V 3BV 201 b 16 1.52 1.63 152.9 -1.40 -0.22 18.2 79 11 6 11 8 10 2 0  3BV 301 V MES 302 V 3BV 201 b 17 1.50 1.62 154.4 -1.74 -0.31 20.6 83 12 9 13 5 11 0 0  3BV 301 V MES 302 V 3BV 201 b 18 1.50 2.07 156.1 -1.65 -0.32 17.1 81 13 6 14 8 12 1 1  3BV 301 V MES 302 V 3BV 201 b 19 1.51 1.62 153.3 -2.06 -0.38 23.2 82 15 9 11 5 10 0 0  3BV 301 V MES 302 V 3BV 201 b 20 1.52 1.62 155.4 -2.11 -0.41 22.5 82 13 7 11 5 9 1 0  3BV 301 V MES 302 V 3BV 201 b 21 1.30 1.58 161.2 -1.87 -0.35 19.3 84 13 5 14 5 11 0 0  3BV 301 V MES 302 V 3BV 201 b 22 1.60 1.64 157.9 -1.85 -0.36 19.6 82 11 5 14 7 12 0 0  3BV 301 V MES 302 V 3BV 201 b 23 1.59 1.64 164.4 -1.89 -0.41 18.9 84 12 8 15 5 10 0 0  3BV 301 V MES 302 V 3BV 201 b 24 1.55 1.62 159.6 -1.34 -0.24 17.5 83 14 7 11 10 10 0 0  3BV 301 V MES 302 V 3BV 201 b 25 1.55 1.61 167.2 -1.81 -0.36 19.4 84 13 7 14 6 11 0 0  3BV 301 V MES 302 V 3BV 201 b 26 1.56 1.61 163.5 -1.93 -0.37 21.7 84 16 7 13 7 10 0 0  3BV 301 V MES 302 V 3BV 201 b 27 1.54 1.61 165.7 -2.06 -0.41 20.7 81 16 7 12 4 12 0 0  3BV 301 V MES 302 V 3BV 201 b 28 1.46 2.15 167.9 -1.93 -0.36 19.5 81 12 8 15 8 11 1 0  3BV 301 V MES 302 V 3BV 201 b 29 1.27 1.25 167.9 -1.27 -0.27 15.2 81 12 4 14 8 12 1 0  3BV 301 V MES 302 V 3BV 201 b 30 1.34 1.56 169.9 -1.38 -0.29 16.0 80 13 5 13 9 11 1 0  3BV 301 V MES 302 V 3BV 201 b 31 1.54 1.60 168.3 -1.50 -0.30 16.9 79 12 6 12 9 10 2 0  3BV 301 V MES 302 V 3BV 201 b 32 1.51 2.24 172.3 -1.99 -0.41 21.3 83 15 10 14 6 11 0 0  3BV 301 V MES 302 V 3BV 201 b 33 1.30 1.24 174.8 -1.71 -0.33 19.9 84 13 10 18 13 9 0 0  3BV 301 V MES 302 V 3BV 201 b 34 1.13 2.22 25.7 -0.54 -0.05 2.8 78 0 1 3 1 2 2 0   35 2.21 2.45 15.7 1.40 0.31 8.0 73 1 0 0 4 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.