 |
PDBsum entry 5fge
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 5fge calculated with MOLE 2.0
|
PDB id
|
|
|
|
5fge
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
24 tunnels,
coloured by tunnel radius |
 |
33 tunnels,
coloured by
tunnel radius
|
33 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.36 |
1.45 |
77.3 |
-0.61 |
-0.23 |
12.8 |
81 |
 |
6 |
3 |
6 |
7 |
7 |
1 |
2 |
 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
 |
2 |
 |
1.37 |
1.46 |
79.3 |
-0.85 |
-0.31 |
14.1 |
81 |
7 |
5 |
6 |
6 |
6 |
1 |
2 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
3 |
 |
1.34 |
1.48 |
101.2 |
-1.35 |
-0.25 |
19.4 |
83 |
8 |
8 |
9 |
8 |
8 |
2 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
4 |
 |
1.32 |
1.46 |
120.8 |
-1.34 |
-0.32 |
15.6 |
83 |
8 |
7 |
10 |
9 |
8 |
0 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
5 |
 |
1.31 |
1.47 |
121.6 |
-1.33 |
-0.32 |
16.2 |
83 |
8 |
6 |
10 |
9 |
8 |
0 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
6 |
 |
1.35 |
1.47 |
133.3 |
-1.46 |
-0.36 |
16.1 |
86 |
9 |
8 |
14 |
8 |
7 |
2 |
0 |
3BV 301 H MES 302 H 3BV 201 N 3BV 301 V MES 302 V 3BV 201 b
|
 |
7 |
 |
1.35 |
1.46 |
143.4 |
-2.01 |
-0.30 |
23.2 |
82 |
12 |
7 |
10 |
5 |
9 |
1 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
8 |
 |
1.36 |
1.46 |
142.4 |
-1.50 |
-0.22 |
18.3 |
80 |
10 |
6 |
13 |
8 |
13 |
1 |
1 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
9 |
 |
1.41 |
1.46 |
149.3 |
-1.37 |
-0.37 |
14.4 |
85 |
9 |
8 |
13 |
7 |
8 |
1 |
2 |
3BV 301 H MES 302 H 3BV 201 N 3BV 301 V MES 302 V 3BV 201 b
|
 |
10 |
 |
1.36 |
1.47 |
144.9 |
-1.81 |
-0.28 |
20.5 |
81 |
9 |
5 |
13 |
6 |
12 |
0 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
11 |
 |
1.31 |
1.55 |
148.1 |
-1.80 |
-0.25 |
20.6 |
84 |
12 |
5 |
14 |
5 |
11 |
0 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
12 |
 |
1.36 |
1.46 |
149.8 |
-1.88 |
-0.29 |
22.7 |
83 |
15 |
7 |
12 |
6 |
10 |
1 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
13 |
 |
1.37 |
1.46 |
151.0 |
-1.88 |
-0.31 |
20.6 |
83 |
11 |
8 |
14 |
5 |
10 |
0 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
14 |
 |
1.37 |
1.46 |
155.7 |
-2.14 |
-0.42 |
21.3 |
84 |
13 |
7 |
11 |
6 |
7 |
1 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
15 |
 |
1.39 |
1.47 |
155.3 |
-1.92 |
-0.29 |
21.0 |
81 |
11 |
8 |
14 |
7 |
10 |
1 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
16 |
 |
1.37 |
1.46 |
154.9 |
-1.73 |
-0.30 |
20.0 |
83 |
12 |
9 |
13 |
5 |
11 |
0 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
17 |
 |
1.37 |
1.46 |
154.9 |
-1.39 |
-0.20 |
17.6 |
79 |
10 |
6 |
11 |
8 |
10 |
2 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
18 |
 |
1.39 |
1.47 |
157.7 |
-1.84 |
-0.36 |
18.7 |
83 |
11 |
5 |
14 |
7 |
10 |
0 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
19 |
 |
1.37 |
1.46 |
156.9 |
-1.63 |
-0.31 |
16.5 |
83 |
13 |
6 |
14 |
9 |
10 |
0 |
1 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
20 |
 |
1.38 |
1.47 |
157.1 |
-2.06 |
-0.33 |
22.6 |
81 |
15 |
9 |
11 |
4 |
12 |
0 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
21 |
 |
1.40 |
1.46 |
166.4 |
-1.75 |
-0.32 |
19.0 |
84 |
13 |
8 |
13 |
7 |
10 |
0 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
22 |
 |
1.32 |
1.51 |
162.5 |
-1.86 |
-0.33 |
18.5 |
85 |
13 |
4 |
15 |
5 |
11 |
0 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
23 |
 |
1.39 |
1.47 |
164.1 |
-1.92 |
-0.41 |
18.3 |
85 |
12 |
8 |
15 |
6 |
8 |
0 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
24 |
 |
1.27 |
1.28 |
169.5 |
-1.25 |
-0.25 |
14.7 |
82 |
12 |
4 |
14 |
9 |
10 |
1 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
25 |
 |
1.39 |
1.47 |
164.8 |
-1.98 |
-0.35 |
21.6 |
84 |
16 |
7 |
13 |
7 |
10 |
0 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
26 |
 |
1.38 |
1.47 |
165.2 |
-2.03 |
-0.40 |
19.6 |
82 |
16 |
7 |
11 |
5 |
10 |
0 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
27 |
 |
1.38 |
1.46 |
169.5 |
-1.98 |
-0.37 |
19.2 |
82 |
13 |
8 |
15 |
10 |
9 |
1 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
28 |
 |
1.40 |
1.46 |
168.2 |
-1.61 |
-0.28 |
17.2 |
83 |
13 |
7 |
12 |
7 |
9 |
1 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
29 |
 |
1.21 |
1.67 |
168.8 |
-1.33 |
-0.30 |
14.7 |
82 |
13 |
5 |
13 |
10 |
9 |
1 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
30 |
 |
1.05 |
1.21 |
186.8 |
-1.31 |
-0.22 |
17.4 |
80 |
13 |
6 |
13 |
12 |
11 |
1 |
0 |
3BV 301 V MES 302 V 3BV 201 b
|
 |
31 |
 |
1.15 |
2.05 |
26.0 |
-0.46 |
0.02 |
2.8 |
74 |
0 |
1 |
2 |
1 |
2 |
2 |
0 |
|
 |
32 |
 |
1.13 |
2.23 |
26.4 |
-0.52 |
-0.03 |
2.9 |
74 |
0 |
1 |
2 |
1 |
2 |
2 |
0 |
|
 |
33 |
 |
1.32 |
1.53 |
16.4 |
1.45 |
0.25 |
6.4 |
70 |
1 |
0 |
0 |
5 |
0 |
1 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |