 |
PDBsum entry 5fg5
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 5fg5 calculated with MOLE 2.0
|
PDB id
|
|
|
|
5fg5
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
3 pores,
coloured by radius |
 |
4 pores,
coloured by radius
|
4 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.49 |
1.49 |
30.3 |
-1.98 |
-0.33 |
26.1 |
75 |
 |
3 |
3 |
1 |
2 |
2 |
1 |
0 |
 |
|
 |
 |
2 |
 |
1.49 |
1.49 |
32.7 |
-3.09 |
-0.68 |
36.6 |
86 |
7 |
4 |
2 |
1 |
0 |
0 |
0 |
|
 |
3 |
 |
1.73 |
3.73 |
34.6 |
-2.78 |
-0.65 |
21.3 |
89 |
4 |
2 |
3 |
1 |
0 |
0 |
0 |
|
 |
4 |
 |
1.38 |
1.70 |
74.6 |
0.95 |
0.39 |
6.8 |
76 |
1 |
2 |
1 |
4 |
3 |
2 |
1 |
5XF 802 B
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |