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PDBsum entry 5fer

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Top Page protein metals Protein-protein interface(s) links
Ligase PDB id
5fer
Contents
Protein chains
79 a.a.
145 a.a.
76 a.a.
Metals
_ZN ×4
Waters ×68

References listed in PDB file
Key reference
Title Functional role of trim e3 ligase oligomerization and regulation of catalytic activity.
Authors M.G.Koliopoulos, D.Esposito, E.Christodoulou, I.A.Taylor, K.Rittinger.
Ref. Embo J, 2016, 35, 1204-1218. [DOI no: 10.15252/embj.201593741]
PubMed id 27154206
Abstract
TRIM E3 ubiquitin ligases regulate a wide variety of cellular processes and are particularly important during innate immune signalling events. They are characterized by a conserved tripartite motif in their N-terminal portion which comprises a canonical RING domain, one or two B-box domains and a coiled-coil region that mediates ligase dimerization. Self-association via the coiled-coil has been suggested to be crucial for catalytic activity of TRIMs; however, the precise molecular mechanism underlying this observation remains elusive. Here, we provide a detailed characterization of the TRIM ligases TRIM25 and TRIM32 and show how their oligomeric state is linked to catalytic activity. The crystal structure of a complex between the TRIM25 RING domain and an ubiquitin-loaded E2 identifies the structural and mechanistic features that promote a closed E2~Ub conformation to activate the thioester for ubiquitin transfer allowing us to propose a model for the regulation of activity in the full-length protein. Our data reveal an unexpected diversity in the self-association mechanism of TRIMs that might be crucial for their biological function.
PROCHECK
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 Headers

 

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