PDBsum entry 5fdv

RIBOSOME

PDB id: 5fdv

Contents

Protein chains

×102 chains

DNA/RNA

× DNA chains
×6 RNA chains

Ligands

SF4 ×2

A

Metals

_ZN ×12

_MG ×2420

Waters ×4546

• PDB id:

  5fdv

• Name: RIBOSOME
• Title: Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosome
• Structure: 50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, 50S ribosomal protein L5, 50S ribosomal protein L6, 50S ribosomal protein L9, 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, 50S ribosomal protein L16, 50S ribosomal protein L17, 50S ribosomal protein L18, 50S ribosomal protein L19, 50S ribosomal protein L20, 50S ribosomal protein L21, 50S ribosomal protein L22, 50S ribosomal protein L23, 50S ribosomal protein L24, 50S ribosomal protein L25, 50S ribosomal protein L27, 50S ribosomal protein L28, 50S ribosomal protein L29, 50S ribosomal protein L30, 50S ribosomal protein L31, 50S ribosomal protein L32, 50S ribosomal protein L33, 50S ribosomal protein L34, 50S ribosomal protein L35, 50S ribosomal protein L36, Ribosome-associated inhibitor A, 30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30
• Source: Thermus thermophilus HB8
• Authors: Seefeldt, A.C., Graf, M., Perebaskine, N., Nguyen, F., Arenz, S., Mardirossian, M., Scocchi, M., Wilson, D.N., Innis, C.A.
• Key ref: (2016). Structure of the mammalian antimicrobial peptide bac7(1-16) bound within the exit tunnel of a bacterial ribosome.. Nucleic acids res., 44, 2429-2438. PubMed id: 26792896

Note. PDBsum analyses are not available for this structure because of its large size. To get more detailed information on it, please go to its PDBe page.