PDBsum entry 5fbo Go to PDB code:  Tunnel analysis for: 5fbo calculated with MOLE 2.0 PDB id 5fbo Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.36 3.70 19.7 -0.33 -0.22 15.1 87 2 1 2 4 0 0 1  5WH 1001 A 2 1.13 1.40 21.4 0.54 0.17 14.5 79 2 3 0 4 1 0 0  5WH 1001 A 3 1.51 3.34 21.5 1.89 0.84 8.1 88 1 2 0 9 1 0 0  5WH 1001 A 4 2.36 3.70 23.4 0.31 0.00 12.4 84 1 1 2 5 0 0 1  5WH 1001 A 5 1.67 3.01 24.6 1.46 0.63 10.0 87 2 3 0 7 0 0 0  5WH 1001 A 6 1.68 2.99 25.1 1.67 0.66 8.0 87 2 2 0 7 0 0 0  5WH 1001 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.