PDBsum entry 5f9f Go to PDB code:  Pore analysis for: 5f9f calculated with MOLE 2.0 PDB id 5f9f Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.30 2.33 43.3 -0.17 0.17 15.7 76 5 0 2 9 2 2 1  BU3 1005 G 2 1.52 1.62 51.4 -2.03 -0.64 23.5 76 5 3 1 1 0 1 0  A 2 B A 3 B U 4 B A 5 B U 6 B U 15 B A 16 B U 17 B U 18 B U 22 B U 23 B 3 1.71 2.77 52.3 -1.39 -0.38 18.3 81 5 2 4 4 2 1 1  MG 1002 K ETF 1003 K A 5 L U 6 L A 7 L G 13 L A 14 L U 20 L 4 2.14 2.97 53.2 -2.50 -0.64 28.4 76 7 7 2 0 2 2 0   5 2.41 4.77 55.6 -2.47 -0.62 27.0 75 8 4 4 0 3 1 0  A 2 B A 3 B U 4 B A 5 B U 6 B U 15 B A 16 B U 17 B U 18 B 6 1.66 1.80 59.7 -1.06 -0.25 14.9 81 6 4 3 5 2 1 1  BU3 1005 G U 6 H A 7 H U 18 H A 19 H U 20 H 7 2.01 2.98 64.1 -1.03 -0.36 15.2 79 3 3 1 2 2 1 0  A 10 J A 14 J U 15 J A 16 J 8 1.47 3.22 69.5 -1.03 -0.31 16.7 78 7 3 3 5 2 1 1  A 7 J A 8 J U 9 J G 11 J A 14 J U 15 J 9 1.67 1.67 69.1 -2.14 -0.50 24.2 82 9 4 3 1 2 0 0  U 4 D A 5 D U 6 D U 15 D A 16 D U 18 D A 19 D U 20 D 10 1.41 1.50 74.3 -2.23 -0.49 28.5 80 10 4 1 2 0 2 0  BU3 1003 C A 2 D A 3 D U 4 D A 5 D U 6 D U 15 D A 16 D U 18 D A 19 D U 20 D U 22 D U 23 D 11 1.54 1.62 76.9 -2.22 -0.40 24.2 77 13 5 3 2 4 2 0  A 2 B A 3 B U 22 B U 23 B 12 2.56 4.09 87.0 -2.08 -0.51 17.5 78 8 4 8 2 2 1 1  A 3 L U 4 L G 13 L A 14 L U 15 L 13 2.04 2.12 92.0 -1.88 -0.42 24.3 79 9 6 4 2 1 3 1  A 3 D U 4 D U 15 D A 16 D 14 1.64 2.77 102.6 -1.49 -0.38 18.3 80 9 7 4 6 3 4 1  BU3 1005 G U 6 H A 7 H U 18 H A 19 H U 20 H 15 1.51 1.54 120.2 -2.35 -0.58 21.1 79 6 8 8 0 2 6 1  A 3 B 16 1.62 1.59 141.7 -1.26 -0.31 16.1 82 18 5 12 9 6 1 1  U 4 D A 5 D U 6 D U 15 D A 16 D U 18 D A 19 D U 20 D BU3 1005 G U 6 H A 7 H U 18 H A 19 H U 20 H 17 1.52 1.54 145.1 -2.00 -0.56 18.6 79 6 9 10 2 3 5 1  A 3 B 18 2.09 3.82 147.8 -1.46 -0.60 15.1 86 9 9 6 4 3 1 0  BU3 1004 A A 8 B U 9 B A 10 B A 19 B U 20 B U 4 F A 10 F G 11 F G 13 F A 14 F U 15 F A 16 F 19 1.27 1.92 152.6 -1.48 -0.41 21.3 80 15 8 8 8 3 2 2   20 1.54 1.58 159.9 -2.32 -0.62 21.4 81 9 9 11 2 1 4 2  A 3 B A 3 D U 4 D U 15 D A 16 D 21 1.48 1.59 181.4 -1.80 -0.49 24.9 82 17 9 10 8 0 2 1  A 2 J A 3 J U 4 J A 5 J U 6 J U 15 J A 16 J U 18 J U 22 J U 23 J 22 1.55 2.58 194.6 -1.80 -0.46 20.8 85 21 11 18 6 6 2 0  U 4 H A 5 H U 6 H A 14 H U 15 H A 16 H U 18 H U 4 J A 5 J U 6 J U 15 J A 16 J U 18 J A 19 J 23 1.50 2.59 200.4 -1.67 -0.45 18.6 82 20 11 14 6 5 4 1  BU3 1005 G A 5 H U 6 H A 7 H G 13 H A 14 H U 15 H MG 101 H U 4 J A 5 J U 6 J U 15 J A 16 J U 18 J A 19 J 24 1.48 2.45 203.2 -2.17 -0.59 23.0 82 19 14 14 3 5 3 0  A 14 H U 15 H U 4 J A 5 J U 6 J U 15 J A 16 J U 18 J A 19 J 25 1.46 1.82 207.9 -2.04 -0.51 24.2 82 21 14 11 3 4 5 0  A 14 H U 15 H U 4 J A 5 J U 6 J A 7 J A 8 J A 14 J U 15 J A 16 J U 17 J U 18 J A 19 J 26 1.48 2.52 218.7 -1.74 -0.42 20.8 82 18 15 12 8 6 4 1  A 14 H U 15 H MG 1002 I A 7 J A 8 J U 18 J A 19 J U 20 J 27 1.44 2.66 215.9 -1.33 -0.33 16.6 82 18 12 12 11 6 5 2  BU3 1005 G A 5 H U 6 H A 7 H G 13 H A 14 H U 15 H MG 101 H MG 1002 I A 7 J A 8 J U 18 J A 19 J U 20 J 28 1.48 2.35 232.6 -2.17 -0.54 23.3 81 25 17 14 3 6 5 1  U 4 H A 5 H U 6 H A 14 H U 15 H A 16 H U 18 H U 4 J A 5 J U 6 J U 15 J A 16 J U 18 J A 19 J 29 1.46 2.03 248.2 -1.79 -0.41 21.1 81 24 18 12 8 7 6 2  U 4 H A 5 H U 6 H A 14 H U 15 H A 16 H U 18 H MG 1002 I A 7 J A 8 J U 18 J A 19 J U 20 J 30 1.47 1.81 316.8 -1.86 -0.51 19.8 83 21 18 20 8 5 7 1  A 3 B A 14 H U 15 H A 10 J A 14 J A 16 J U 17 J U 18 J A 19 J Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.