PDBsum entry 5f4z Go to PDB code:  Tunnel analysis for: 5f4z calculated with MOLE 2.0 PDB id 5f4z Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.06 4.04 46.4 0.62 0.37 10.5 76 3 4 0 10 5 1 0  MSE 93 A MSE 161 A 2 1.23 1.22 29.1 0.46 0.27 7.1 72 2 1 1 6 3 1 0  MSE 93 B MSE 161 B 3 1.23 1.23 29.2 0.63 0.23 6.0 72 2 1 1 6 3 1 0  MSE 93 B MSE 161 B 4 2.24 2.29 23.1 -0.99 -0.46 18.1 79 1 2 0 1 1 0 0  MSE 1 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.