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PDBsum entry 5eyd

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protein ligands links
Transferase/transferase inhibitor PDB id
5eyd

 

 

 

 

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Contents
Protein chain
289 a.a.
Ligands
5T1
Waters ×247
PDB id:
5eyd
Name: Transferase/transferase inhibitor
Title: Crystal structure of c-met in complex with amg 337
Structure: Hepatocyte growth factor receptor. Chain: a. Fragment: residues 1048-1351. Synonym: hgf receptor,hgf/sf receptor,proto-oncogenE C-met,scatter factor receptor,sf receptor,tyrosine-protein kinase met. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: met. Expressed in: trichoplusia ni. Expression_system_taxid: 7111.
Resolution:
1.85Å     R-factor:   0.196     R-free:   0.249
Authors: D.A.Whittington,A.M.Long
Key ref: A.A.Boezio et al. (2016). Discovery of (R)-6-(1-(8-Fluoro-6-(1-methyl-1H-pyrazol-4-yl)-[1,2,4]triazolo[4,3-a]pyridin-3-yl)ethyl)-3-(2-methoxyethoxy)-1,6-naphthyridin-5(6H)-one (AMG 337), a Potent and Selective Inhibitor of MET with High Unbound Target Coverage and Robust In Vivo Antitumor Activity. J Med Chem, 59, 2328-2342. PubMed id: 26812066 DOI: 10.1021/acs.jmedchem.5b01716
Date:
24-Nov-15     Release date:   10-Feb-16    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
P08581  (MET_HUMAN) -  Hepatocyte growth factor receptor from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1390 a.a.
289 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.7.10.1  - receptor protein-tyrosine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H+
L-tyrosyl-[protein]
+ ATP
= O-phospho-L-tyrosyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
DOI no: 10.1021/acs.jmedchem.5b01716 J Med Chem 59:2328-2342 (2016)
PubMed id: 26812066  
 
 
Discovery of (R)-6-(1-(8-Fluoro-6-(1-methyl-1H-pyrazol-4-yl)-[1,2,4]triazolo[4,3-a]pyridin-3-yl)ethyl)-3-(2-methoxyethoxy)-1,6-naphthyridin-5(6H)-one (AMG 337), a Potent and Selective Inhibitor of MET with High Unbound Target Coverage and Robust In Vivo Antitumor Activity.
A.A.Boezio, K.W.Copeland, K.Rex, B.K Albrecht, D.Bauer, S.F.Bellon, C.Boezio, M.A.Broome, D.Choquette, A.Coxon, I.Dussault, S.Hirai, R.Lewis, M.H.Lin, J.Lohman, J.Liu, E.A.Peterson, M.Potashman, R.Shimanovich, Y.Teffera, D.A.Whittington, K.R.Vaida, J.C.Harmange.
 
  ABSTRACT  
 
Deregulation of the receptor tyrosine kinase mesenchymal epithelial transition factor (MET) has been implicated in several human cancers and is an attractive target for small molecule drug discovery. Herein, we report the discovery of compound 23 (AMG 337), which demonstrates nanomolar inhibition of MET kinase activity, desirable preclinical pharmacokinetics, significant inhibition of MET phosphorylation in mice, and robust tumor growth inhibition in a MET-dependent mouse efficacy model.
 

 

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