PDBsum entry 5eok Go to PDB code:  Tunnel analysis for: 5eok calculated with MOLE 2.0 PDB id 5eok Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.40 1.40 23.7 -0.37 -0.44 6.0 91 1 0 5 3 0 0 0   2 1.37 1.39 37.5 0.22 -0.16 10.5 80 2 2 3 4 0 0 1   3 1.41 1.57 17.8 -0.19 -0.47 2.8 85 0 0 0 1 1 0 0   4 1.42 1.58 22.5 -0.72 -0.51 10.6 85 1 2 1 2 2 0 0   5 1.23 2.66 27.2 -0.17 -0.05 7.0 75 1 1 0 3 2 1 1   6 1.48 1.48 16.5 -0.59 -0.30 5.0 83 2 0 1 1 2 0 0   7 1.18 1.56 18.1 -1.49 -0.60 20.0 84 2 1 1 2 1 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.