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PDBsum entry 5eob

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protein ligands links
Transferase PDB id
5eob

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
288 a.a.
Ligands
5QQ
Waters ×119
PDB id:
5eob
Name: Transferase
Title: Crystal structure of cmet in complex with novel inhibitor
Structure: Hepatocyte growth factor receptor. Chain: a. Fragment: unp residues 1038-1346. Synonym: hgf receptor,hgf/sf receptor,proto-oncogenE C-met,scatter factor receptor,sf receptor,tyrosine-protein kinase met. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: met. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Resolution:
1.75Å     R-factor:   0.174     R-free:   0.197
Authors: Q.Liu,T.Chen,Y.Xu
Key ref: Z.Zhan et al. (2016). Discovery of 6-(difluoro(6-(4-fluorophenyl)-[1,2,4]triazolo[4,3-b][1,2,4]triazin-3-yl)methyl)quinoline as a highly potent and selective c-Met inhibitor. Eur J Med Chem, 116, 239-251. PubMed id: 27061987 DOI: 10.1016/j.ejmech.2016.03.076
Date:
10-Nov-15     Release date:   19-Oct-16    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P08581  (MET_HUMAN) -  Hepatocyte growth factor receptor from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1390 a.a.
288 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.7.10.1  - receptor protein-tyrosine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H+
L-tyrosyl-[protein]
+ ATP
= O-phospho-L-tyrosyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
DOI no: 10.1016/j.ejmech.2016.03.076 Eur J Med Chem 116:239-251 (2016)
PubMed id: 27061987  
 
 
Discovery of 6-(difluoro(6-(4-fluorophenyl)-[1,2,4]triazolo[4,3-b][1,2,4]triazin-3-yl)methyl)quinoline as a highly potent and selective c-Met inhibitor.
Z.Zhan, X.Peng, Q.Liu, F.Chen, Y.Ji, S.Yao, Y.Xi, Y.Lin, T.Chen, Y.Xu, J.Ai, M.Geng, W.Duan.
 
  ABSTRACT  
 
c-Met/HGF overexpression has been detected in many human malignancies including tumors which are resistant to anticancer therapy. Disrupting the aberrant c-Met/HGF axis has enjoyed significant progress in both preclinical and clinical antitumor campaign. To eliminate the OCH2-related metabolic deficiency of our previously reported triazolotriazine 2, we synthesized a series of CH2-/CF2-linked triazolotriazines and assessed their c-Met activities, leading to the highly potent compound 23 with IC50 values of 0.24 nM of enzymatic activity in c-Met and 0.85 nM of cellular activity in EBC-1 cancer cell line, as well as with complete tumor regression in EBC-1 xenograft mice model at dose of 25 mg/kg via oral administration. Based on its potent anti-proliferative activities and favorable pharmacokinetic properties, 23 has been selected as a drug candidate for preclinical investigation.
 

 

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