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PDBsum entry 5emb

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Protein transport PDB id
5emb
Contents
Protein chain
96 a.a.
Ligands
GLU-GLU-TRP-SEP-
THR-VAL-MET
Waters ×182

References listed in PDB file
Key reference
Title A molecular code for endosomal recycling of phosphorylated cargos by the snx27-Retromer complex.
Authors T.Clairfeuille, C.Mas, A.S.Chan, Z.Yang, M.Tello-Lafoz, M.Chandra, J.Widagdo, M.C.Kerr, B.Paul, I.Mérida, R.D.Teasdale, N.J.Pavlos, V.Anggono, B.M.Collins.
Ref. Nat Struct Mol Biol, 2016, 23, 921-932.
PubMed id 27595347
Abstract
Recycling of internalized receptors from endosomal compartments is essential for the receptors' cell-surface homeostasis. Sorting nexin 27 (SNX27) cooperates with the retromer complex in the recycling of proteins containing type I PSD95-Dlg-ZO1 (PDZ)-binding motifs. Here we define specific acidic amino acid sequences upstream of the PDZ-binding motif required for high-affinity engagement of the human SNX27 PDZ domain. However, a subset of SNX27 ligands, such as the β2adrenergic receptor and N-methyl-D-aspartate (NMDA) receptor, lack these sequence determinants. Instead, we identified conserved sites of phosphorylation that substitute for acidic residues and dramatically enhance SNX27 interactions. This newly identified mechanism suggests a likely regulatory switch for PDZ interaction and protein transport by the SNX27-retromer complex. Defining this SNX27 binding code allowed us to classify more than 400 potential SNX27 ligands with broad functional implications in signal transduction, neuronal plasticity and metabolite transport.
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