PDBsum entry 5ekv Go to PDB code:  Tunnel analysis for: 5ekv calculated with MOLE 2.0 PDB id 5ekv Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.31 1.40 20.9 0.82 0.93 2.4 61 0 1 1 6 5 0 0   2 1.46 2.45 15.8 0.81 0.66 4.3 62 0 1 1 6 4 0 0   3 1.48 3.38 17.5 1.18 0.56 1.6 60 0 0 1 6 4 0 0   4 1.61 2.39 16.3 -0.73 0.05 13.0 65 1 1 0 2 1 1 0   5 1.61 2.43 29.2 -1.06 0.18 18.5 66 2 2 0 3 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.