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PDBsum entry 5ei9

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Top Page protein dna_rna metals Protein-protein interface(s) pores links
Pore analysis for: 5ei9 calculated with MOLE 2.0 PDB id
5ei9
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.15 1.16 28.0 -3.07 -0.56 37.7 88 6 1 1 0 0 0 0  DG 15 A DG 16 A DA 17 A DG 19 A DC 20 A DC 21 A
DT 22 B DG 23 B DG 24 B DC 25 B
2 2.49 2.49 29.5 -1.46 -0.87 14.4 78 2 2 1 0 0 0 0  DA 13 C DC 35 D DA 36 D
3 1.16 1.33 36.1 -1.84 -0.47 20.1 73 4 1 0 0 2 1 0  DT 12 A DA 13 A DT 27 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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