PDBsum entry 5ef4 Go to PDB code:  Pore analysis for: 5ef4 calculated with MOLE 2.0 PDB id 5ef4 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.78 1.87 39.0 -1.09 -0.30 12.0 88 3 3 8 5 2 0 0   2 2.06 2.26 48.1 -1.47 -0.34 23.6 79 6 3 1 4 1 2 0   3 1.54 1.61 49.0 -0.86 -0.41 12.6 89 5 3 9 5 1 0 0   4 1.19 1.30 97.3 -1.53 -0.52 13.7 79 4 3 4 1 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.