PDBsum entry 5edv Go to PDB code:  Pore analysis for: 5edv calculated with MOLE 2.0 PDB id 5edv Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   19 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.59 3.46 31.5 -2.64 -0.59 20.1 78 5 4 6 1 2 1 0   2 1.78 2.03 48.3 -1.98 -0.57 22.6 78 6 5 5 4 0 4 0   3 1.25 1.51 52.8 -1.29 -0.35 20.4 74 4 3 2 4 1 1 2   4 1.28 1.53 55.9 -1.31 -0.36 17.2 76 6 3 3 6 0 4 0   5 1.96 2.42 62.0 -1.05 -0.34 17.9 82 3 5 4 8 1 1 0   6 2.59 2.94 72.8 -1.60 -0.52 21.8 81 7 4 4 4 1 1 0   7 1.87 2.10 75.0 -1.26 -0.47 16.1 80 9 3 4 8 1 1 0   8 2.30 2.49 74.3 -2.36 -0.62 26.5 81 7 5 5 2 1 1 0   9 1.78 2.03 78.3 -1.40 -0.44 16.9 80 9 6 5 7 1 4 0   10 1.14 1.40 93.8 -1.56 -0.47 20.8 79 7 6 5 9 0 4 0   11 1.22 1.55 112.6 -1.87 -0.52 23.6 80 7 6 4 7 1 1 1   12 1.16 1.40 126.0 -1.30 -0.35 21.0 85 9 6 6 11 0 1 1   13 1.15 2.13 129.7 -0.63 -0.32 12.2 81 2 6 8 6 0 2 3   14 1.24 1.48 158.4 -1.63 -0.51 20.4 79 13 8 9 12 2 2 1   15 1.20 2.30 161.3 -0.91 -0.41 15.4 80 8 8 9 11 0 4 3   16 2.59 2.92 164.4 -1.75 -0.48 21.9 83 16 10 10 9 2 1 0   17 1.29 1.64 168.5 -1.32 -0.46 18.2 79 8 11 11 8 0 6 3   18 1.29 1.78 176.0 -1.20 -0.33 15.8 77 12 5 10 11 3 4 3   19 1.31 1.75 219.2 -1.28 -0.40 18.8 83 12 12 12 12 0 3 3   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.