PDBsum entry 5ede Go to PDB code:  Pore analysis for: 5ede calculated with MOLE 2.0 PDB id 5ede Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.07 2.67 54.6 -3.28 -0.38 35.5 70 9 3 4 1 3 1 0   2 2.11 2.58 62.8 -2.72 -0.41 32.3 76 14 3 3 5 2 3 0   3 1.42 1.42 62.4 -0.91 -0.31 15.3 91 3 1 6 5 0 0 0   4 1.25 1.25 63.1 -1.42 -0.20 20.4 85 7 3 5 7 3 0 1  5M6 804 B 5 2.61 2.73 63.7 -2.79 -0.42 31.4 77 13 4 3 4 2 2 0   6 1.20 1.20 78.2 -1.70 -0.37 19.8 88 8 4 7 8 2 0 1  5M6 803 C 7 1.28 1.28 84.9 -1.55 -0.22 21.4 79 11 4 6 11 5 3 1  5M6 804 B 8 1.17 1.44 86.2 -1.20 -0.23 18.5 77 6 3 6 6 2 2 1   9 1.18 1.18 100.5 -1.76 -0.33 20.5 83 10 6 8 10 4 2 1  5M6 803 C 10 1.12 1.45 137.3 -2.06 -0.43 26.5 78 13 7 7 8 2 1 0   11 1.88 2.09 143.6 -2.73 -0.53 30.3 78 17 10 9 3 2 3 1   12 1.17 1.26 194.1 -2.13 -0.43 27.2 80 26 10 9 12 2 6 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.