PDBsum entry 5eam Go to PDB code:  Tunnel analysis for: 5eam calculated with MOLE 2.0 PDB id 5eam Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.72 1.95 25.9 0.15 0.18 9.0 74 2 2 2 2 4 0 2  5MN 401 B UNX 418 B UNX 419 B 2 1.56 2.24 29.4 -1.75 -0.31 21.4 73 4 1 1 1 1 3 0  SO4 402 B BTB 403 B EDO 404 B EDO 406 B 3 1.55 2.16 33.1 -1.56 -0.34 18.9 74 4 1 1 1 2 3 0  SO4 402 B BTB 403 B EDO 404 B EDO 406 B 4 1.57 2.24 39.8 -2.15 -0.33 22.2 82 5 2 4 1 2 2 0  SO4 402 B BTB 403 B EDO 404 B EDO 405 B 5 1.55 2.53 49.0 -2.08 -0.31 23.5 79 8 3 5 2 2 3 0  UNX 405 A SO4 402 B BTB 403 B EDO 404 B EDO 406 B UNX 408 B 6 1.34 1.34 19.6 0.46 0.09 7.8 76 0 2 2 2 3 0 2  5MN 401 A 7 1.58 3.17 24.9 -1.98 -0.23 20.5 73 4 1 1 0 1 3 1  EDO 402 A UNX 403 A UNX 413 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.