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PDBsum entry 5eak
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Pore analysis for: 5eak calculated with  MOLE 2.0
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PDB id
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5eak
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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7 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.48 |
1.60 |
29.3 |
-1.96 |
-0.64 |
27.5 |
78 |
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4 |
4 |
0 |
2 |
0 |
2 |
0 |
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2 |
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1.40 |
1.55 |
29.7 |
-1.43 |
-0.60 |
24.8 |
88 |
4 |
6 |
1 |
3 |
0 |
0 |
0 |
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3 |
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2.14 |
3.35 |
58.4 |
-1.94 |
-0.41 |
19.0 |
77 |
4 |
4 |
3 |
2 |
2 |
2 |
0 |
24R 1000 A
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4 |
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1.42 |
1.59 |
75.3 |
-1.14 |
-0.56 |
17.6 |
79 |
6 |
8 |
4 |
2 |
4 |
0 |
1 |
24R 1000 A
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5 |
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1.80 |
2.35 |
81.2 |
-1.20 |
-0.47 |
19.0 |
80 |
7 |
7 |
4 |
8 |
3 |
0 |
0 |
24R 1000 A 24R 1000 B
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6 |
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2.15 |
3.36 |
88.0 |
-1.17 |
-0.32 |
12.9 |
74 |
4 |
6 |
6 |
3 |
6 |
2 |
1 |
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7 |
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2.15 |
3.36 |
103.9 |
-1.51 |
-0.46 |
18.7 |
77 |
7 |
7 |
5 |
7 |
3 |
2 |
1 |
24R 1000 B
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8 |
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1.44 |
1.62 |
109.9 |
-1.57 |
-0.62 |
23.4 |
81 |
10 |
10 |
3 |
8 |
1 |
0 |
1 |
24R 1000 A 24R 1000 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program