PDBsum entry 5e9d Go to PDB code:  Pore analysis for: 5e9d calculated with MOLE 2.0 PDB id 5e9d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   14 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.42 1.66 26.1 0.68 0.30 6.5 73 3 0 1 3 4 0 0   2 1.63 1.75 28.6 -1.88 -0.62 20.8 82 4 2 2 0 1 0 0   3 1.21 1.47 31.0 0.60 0.30 8.4 73 3 1 2 4 4 0 0   4 4.13 7.28 32.6 -1.87 -0.50 17.0 91 4 1 5 2 0 0 0   5 1.12 1.48 33.3 -2.75 -0.63 33.0 80 5 3 1 0 1 0 0   6 1.17 1.24 46.2 -0.06 -0.06 9.8 79 4 2 4 5 4 0 0   7 3.81 6.38 49.5 -2.37 -0.55 24.2 80 5 5 4 2 1 1 0   8 3.80 6.39 52.3 -2.19 -0.38 27.0 83 5 5 5 2 1 1 0   9 1.16 1.22 69.0 -0.26 -0.03 12.1 83 6 3 7 7 4 0 0   10 1.19 1.26 73.3 -0.82 -0.17 14.5 76 5 5 5 6 5 1 0   11 1.17 1.24 75.1 -0.89 -0.18 14.2 79 8 4 7 7 5 0 0   12 1.18 1.27 110.5 -0.99 -0.27 17.3 81 7 6 5 7 4 0 0   13 1.84 4.24 39.6 -1.25 -0.51 10.2 81 3 3 3 0 4 2 0   14 2.37 3.00 40.5 -1.45 -0.52 13.4 82 2 4 5 1 4 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.