PDBsum entry 5e84 Go to PDB code:  Pore analysis for: 5e84 calculated with MOLE 2.0 PDB id 5e84 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   45 pores, coloured by radius 36 pores, coloured by radius 36 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.26 1.84 25.1 -1.30 -0.22 21.2 80 3 3 3 2 2 0 0   2 1.27 1.81 27.8 -2.98 -0.72 32.5 76 4 6 2 1 2 0 0   3 1.81 1.97 44.7 1.11 0.03 1.7 85 0 0 0 8 1 5 0   4 1.50 1.64 45.3 -1.09 -0.44 16.9 89 3 2 4 5 0 2 0   5 1.27 1.75 49.4 -1.73 -0.47 17.9 83 6 4 4 3 1 2 0   6 1.63 1.76 52.2 -2.29 -0.57 28.7 82 6 4 3 2 0 1 0   7 2.18 4.45 59.6 -1.74 -0.43 16.2 84 8 5 8 7 2 0 0   8 1.42 1.61 62.7 -1.10 -0.46 22.4 90 2 7 2 5 0 1 0   9 2.01 2.59 69.8 -2.14 -0.54 23.3 80 9 7 8 9 1 0 0   10 2.44 2.44 72.1 -2.21 -0.48 26.7 84 9 6 5 3 2 0 0   11 1.51 1.66 74.9 -1.29 -0.38 19.4 86 7 4 3 6 0 3 0   12 1.48 1.62 80.4 -2.21 -0.46 26.7 84 10 7 4 4 2 2 0   13 1.90 2.40 83.7 -2.41 -0.50 24.9 83 7 8 5 3 3 0 0   14 1.93 3.92 87.8 -2.76 -0.49 31.2 83 11 7 4 2 2 1 0   15 2.17 3.98 91.8 -1.46 -0.46 19.9 83 10 7 8 6 2 0 0   16 2.85 4.71 96.9 -2.30 -0.44 26.9 84 11 7 4 4 2 1 0   17 1.47 1.58 104.5 -1.65 -0.45 21.9 84 11 9 7 7 2 2 0   18 1.93 2.39 104.6 -1.97 -0.45 23.4 82 6 8 6 4 3 0 0   19 2.06 3.94 112.0 -2.05 -0.46 25.6 83 12 9 7 5 2 1 0   20 1.54 1.69 112.8 -1.97 -0.44 23.6 83 8 9 5 5 3 2 0   21 2.18 2.95 116.6 -1.64 -0.44 21.3 84 12 8 7 7 2 1 0   22 1.87 2.53 115.4 -2.02 -0.47 24.1 83 9 10 8 6 3 0 0   23 1.94 2.46 120.2 -2.50 -0.45 28.2 81 8 9 5 3 3 1 0   24 1.81 1.96 134.1 -0.79 -0.20 17.5 82 10 5 3 7 2 3 0   25 1.63 3.02 29.5 -2.21 -0.36 25.5 79 5 4 1 0 1 1 0   26 1.26 1.79 30.5 -3.09 -0.71 33.3 76 4 6 2 1 2 0 0   27 1.15 1.30 47.8 -2.55 -0.69 26.1 79 6 2 2 0 0 1 0   28 1.36 1.70 95.0 -3.09 -0.68 36.0 79 13 10 4 0 3 0 0  ATP 801 A 29 1.31 1.71 96.0 -2.65 -0.70 27.9 79 11 9 5 0 3 1 0  ATP 801 A 30 1.18 1.73 119.1 -2.91 -0.70 33.1 81 15 11 7 1 3 1 0  ATP 801 A MG 804 A 31 1.18 1.80 37.6 -3.07 -0.74 35.3 78 7 6 3 1 3 0 0  ATP 801 B 32 1.29 1.41 46.5 -1.78 -0.61 15.7 84 5 3 4 3 0 2 0   33 1.26 1.33 36.3 -1.71 -0.72 28.0 77 2 5 0 4 0 0 0   34 1.68 2.06 27.9 -1.00 -0.20 23.9 78 6 4 0 3 2 0 0   35 1.40 1.80 26.5 1.83 0.49 3.2 80 1 1 0 6 1 2 0   36 1.33 1.43 30.5 1.38 0.37 4.0 82 0 1 0 7 1 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.