PDBsum entry 5e53 Go to PDB code:  Tunnel analysis for: 5e53 calculated with MOLE 2.0 PDB id 5e53 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.15 1.55 23.1 -0.93 0.21 16.3 84 2 2 2 4 2 0 0   2 1.16 1.57 29.6 -0.97 -0.23 15.1 85 3 3 1 4 2 0 0   3 1.17 1.55 36.0 -1.12 -0.10 10.7 80 3 2 3 3 3 2 0   4 1.27 2.74 15.8 -1.62 -0.49 19.9 88 2 2 3 1 1 0 0   5 1.57 1.69 17.3 -0.76 -0.33 17.6 87 3 1 1 2 1 0 0   6 1.16 1.38 15.9 -0.60 -0.64 2.8 95 0 0 2 3 0 1 0   7 0.93 1.39 16.0 -1.67 -0.05 28.0 77 3 0 0 0 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.