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PDBsum entry 5e1j
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Tunnel analysis for: 5e1j calculated with  MOLE 2.0
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PDB id
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5e1j
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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5 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.18 |
1.20 |
39.9 |
0.36 |
0.10 |
9.9 |
82 |
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1 |
2 |
2 |
11 |
2 |
0 |
0 |
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2 |
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1.20 |
1.21 |
50.2 |
-0.97 |
-0.18 |
18.4 |
73 |
3 |
3 |
3 |
7 |
4 |
2 |
1 |
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3 |
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1.17 |
1.25 |
18.6 |
0.32 |
0.05 |
5.9 |
80 |
0 |
1 |
1 |
5 |
3 |
0 |
0 |
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4 |
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1.30 |
1.41 |
18.8 |
0.70 |
0.13 |
6.6 |
84 |
1 |
0 |
1 |
8 |
0 |
0 |
0 |
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5 |
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1.35 |
1.51 |
22.1 |
-0.20 |
-0.05 |
12.2 |
84 |
0 |
3 |
1 |
4 |
1 |
0 |
0 |
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6 |
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1.21 |
1.21 |
16.6 |
1.54 |
0.79 |
0.8 |
77 |
0 |
0 |
1 |
6 |
3 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program