 |
PDBsum entry 5e18
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Transcription/DNA/RNA
|
PDB id
|
|
|
|
5e18
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Contents |
 |
|
|
|
|
|
|
|
|
|
|
|
231 a.a.
|
|
|
|
|
|
|
|
|
|
|
1112 a.a.
|
|
|
|
|
|
|
|
|
|
|
1486 a.a.
|
|
|
|
|
|
|
|
|
|
|
94 a.a.
|
|
|
|
|
|
|
|
|
|
|
335 a.a.
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Generate full PROCHECK analyses
|
PROCHECK summary for 5e18
Ramachandran plot
PROCHECK statistics
1. Ramachandran Plot statistics
No. of
residues %-tage
------ ------
Most favoured regions [A,B,L] 2832 94.0%
Additional allowed regions [a,b,l,p] 171 5.7%
Generously allowed regions [~a,~b,~l,~p] 9 0.3%
Disallowed regions [XX] 0 0.0%
---- ------
Non-glycine and non-proline residues 3012 100.0%
End-residues (excl. Gly and Pro) 15
Glycine residues 258
Proline residues 196
----
Total number of residues 3481
Based on an analysis of 118 structures of resolution of at least 2.0 Angstroms and R-factor no greater than 20.0 a good
quality model would be expected to have over 90% in the most favoured regions [A,B,L].
2. G-Factors
Average
Parameter Score Score
--------- ----- -----
Dihedral angles:-
Phi-psi distribution -0.10
Chi1-chi2 distribution -0.08
Chi1 only -0.04
Chi3 & chi4 0.47
Omega -0.24
-0.06
=====
Main-chain covalent forces:-
Main-chain bond lengths 0.68
Main-chain bond angles 0.60
0.63
=====
OVERALL AVERAGE 0.21
=====
G-factors provide a measure of how unusual, or out-of-the-ordinary, a property is.
Values below -0.5* - unusual
Values below -1.0** - highly unusual
Important note: The main-chain
bond-lengths and bond angles are compared with
the Engh & Huber (1991) ideal values derived
from small-molecule data. Therefore, structures
refined using different restraints may show
apparently large deviations from normality.
|
|
|
