PDBsum entry 5dyk Go to PDB code:  Pore analysis for: 5dyk calculated with MOLE 2.0 PDB id 5dyk Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.27 1.27 28.9 -2.13 -0.69 26.8 84 5 4 0 1 0 0 0   2 2.16 2.23 30.4 -0.72 -0.33 8.6 83 2 2 4 4 0 1 1   3 1.51 1.63 75.5 -2.09 -0.69 15.3 84 3 3 9 2 1 0 1   4 1.57 1.69 91.3 -1.71 -0.55 12.5 82 5 3 10 4 1 1 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.