PDBsum entry 5dw1 Go to PDB code:  Pore analysis for: 5dw1 calculated with MOLE 2.0 PDB id 5dw1 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 pore, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.83 3.41 47.8 -1.95 -0.59 18.0 82 5 6 8 5 2 0 0   2 1.20 1.19 51.4 -1.15 -0.45 14.6 76 4 4 2 3 1 2 0  5GD 501 D 3 1.30 1.36 60.0 -1.06 -0.38 13.9 79 5 5 4 4 2 3 0  5GD 501 C 4 1.45 1.59 60.6 -0.35 -0.05 12.0 76 5 4 4 7 3 2 1  5GD 500 B 5 1.29 1.35 89.3 -1.74 -0.55 16.6 81 7 6 8 9 2 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.