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PDBsum entry 5dnm

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Top Page protein dna_rna ligands metals Protein-protein interface(s) links
Structural protein/DNA PDB id
5dnm
Contents
Protein chains
97 a.a.
82 a.a.
106 a.a.
95 a.a.
87 a.a.
DNA/RNA
Ligands
SO4 ×3
RAX ×2
Metals
_MG

References listed in PDB file
Key reference
Title Allosteric cross-Talk in chromatin can mediate drug-Drug synergy.
Authors Z.Adhireksan, G.Palermo, T.Riedel, Z.Ma, R.Muhammad, U.Rothlisberger, P.J.Dyson, C.A.Davey.
Ref. Nat Commun, 2017, 8, 14860.
PubMed id 28358030
Abstract
Exploitation of drug-drug synergism and allostery could yield superior therapies by capitalizing on the immensely diverse, but highly specific, potential associated with the biological macromolecular landscape. Here we describe a drug-drug synergy mediated by allosteric cross-talk in chromatin, whereby the binding of one drug alters the activity of the second. We found two unrelated drugs, RAPTA-T and auranofin, that yield a synergistic activity in killing cancer cells, which coincides with a substantially greater number of chromatin adducts formed by one of the compounds when adducts from the other agent are also present. We show that this occurs through an allosteric mechanism within the nucleosome, whereby defined histone adducts of one drug promote reaction of the other drug at a distant, specific histone site. This opens up possibilities for epigenetic targeting and suggests that allosteric modulation in nucleosomes may have biological relevance and potential for therapeutic interventions.
PROCHECK
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