PDBsum entry 5dn2 Go to PDB code:  Pore analysis for: 5dn2 calculated with MOLE 2.0 PDB id 5dn2 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.11 1.10 25.8 -1.25 -0.31 16.0 89 3 2 3 2 0 0 0   2 2.17 2.36 27.2 -1.02 -0.45 11.5 87 1 2 6 2 2 0 0   3 3.54 5.53 42.3 -1.99 -0.37 25.6 85 6 3 6 3 0 0 1   4 3.40 3.56 42.7 -1.76 -0.41 15.4 86 6 1 7 3 1 0 0   5 1.21 1.31 43.2 -2.20 -0.73 13.0 83 7 1 7 1 1 1 0   6 1.23 1.33 43.6 -2.34 -0.66 20.4 84 8 3 6 1 0 0 1   7 1.63 1.78 50.9 -1.78 -0.62 24.2 83 8 4 2 1 0 0 1   8 1.14 1.14 64.4 -1.54 -0.33 20.4 87 7 4 7 5 0 0 1   9 1.65 1.81 65.5 -2.14 -0.64 26.6 85 9 7 5 1 1 0 0   10 1.53 1.66 65.9 -2.32 -0.76 21.4 86 9 5 6 0 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.