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PDBsum entry 5dis

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 5dis calculated with MOLE 2.0 PDB id
5dis
Pores calculated on whole structure Pores calculated excluding ligands

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26 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.09 3.69 29.7 -1.59 -0.32 21.9 78 3 3 2 2 2 0 0  
2 1.27 2.02 31.8 -1.25 0.24 16.3 61 2 4 0 1 6 2 0  
3 1.29 1.61 33.0 -0.04 -0.06 8.8 75 2 2 1 5 2 0 0  
4 2.10 3.69 33.4 -1.84 -0.24 25.1 79 4 4 3 3 0 2 0  
5 1.79 4.01 33.6 -2.63 -0.37 32.0 86 7 4 5 3 0 0 0  
6 1.23 1.30 55.7 0.79 0.48 4.0 64 1 3 1 6 8 4 0  
7 1.30 2.99 55.7 -1.39 -0.64 14.6 90 2 3 7 4 2 2 0  
8 1.78 2.96 58.6 -2.38 -0.35 27.1 85 7 5 8 4 0 2 0  
9 1.34 1.34 62.4 -2.52 -0.67 24.3 81 9 4 6 1 3 3 0  
10 1.38 1.54 63.5 -2.28 -0.61 28.3 80 12 8 5 8 2 0 0  
11 1.34 1.34 70.1 -2.39 -0.56 29.6 77 10 7 3 5 4 3 0  
12 2.06 3.33 77.6 -2.30 -0.40 29.2 83 13 4 6 4 1 1 0  
13 1.27 1.57 80.0 -1.65 -0.04 17.4 73 4 5 5 4 8 2 0  
14 1.74 1.73 84.6 -0.41 -0.13 17.2 81 3 7 4 7 2 1 0  
15 2.77 3.06 86.4 -1.56 -0.37 19.9 79 11 6 3 4 2 3 0  
16 2.10 3.61 88.2 -2.10 -0.40 19.0 84 7 5 8 5 4 0 0  
17 1.73 1.74 111.7 -0.96 -0.19 16.9 84 5 8 8 7 3 1 0  
18 2.52 2.60 148.4 -1.84 -0.41 19.4 81 14 8 9 7 6 3 0  
19 1.75 1.83 147.3 -1.16 -0.24 18.4 83 8 10 9 10 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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