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PDBsum entry 5dif
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Pore analysis for: 5dif calculated with  MOLE 2.0
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PDB id
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5dif
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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8 pores,
coloured by radius |
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7 pores,
coloured by radius
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7 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.05 |
3.79 |
26.5 |
-2.09 |
-0.42 |
17.3 |
76 |
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4 |
2 |
3 |
0 |
2 |
1 |
0 |
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GNP 301 A
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2 |
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1.68 |
1.88 |
34.4 |
-2.54 |
-0.76 |
26.6 |
85 |
6 |
6 |
5 |
1 |
0 |
0 |
0 |
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3 |
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1.33 |
1.65 |
35.3 |
-1.54 |
-0.31 |
23.6 |
81 |
5 |
4 |
3 |
3 |
1 |
1 |
0 |
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4 |
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2.01 |
2.55 |
41.9 |
-2.10 |
-0.64 |
4.6 |
81 |
1 |
0 |
9 |
1 |
1 |
2 |
0 |
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5 |
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3.68 |
4.39 |
41.8 |
-3.22 |
-0.79 |
41.8 |
77 |
5 |
9 |
1 |
0 |
0 |
1 |
0 |
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6 |
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3.05 |
3.74 |
45.1 |
-1.94 |
-0.34 |
24.6 |
80 |
4 |
5 |
4 |
1 |
2 |
1 |
0 |
GNP 301 A
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7 |
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1.70 |
1.99 |
63.9 |
-2.42 |
-0.47 |
26.6 |
79 |
8 |
4 |
3 |
2 |
2 |
2 |
0 |
GOL 1107 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program