PDBsum entry 5dfz Go to PDB code:  Pore analysis for: 5dfz calculated with MOLE 2.0 PDB id 5dfz Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.77 2.77 39.1 -0.83 0.10 9.0 71 4 1 5 6 5 4 0   2 2.47 2.65 40.3 -0.02 -0.24 8.3 79 2 1 7 9 2 1 2   3 2.04 2.61 46.2 -0.16 -0.12 6.3 85 4 1 5 7 1 2 0   4 2.36 2.38 50.0 1.16 0.27 2.9 73 1 1 3 10 3 1 2   5 2.59 2.60 53.5 -0.78 -0.29 12.9 86 3 2 5 3 2 0 0   6 2.29 2.84 54.3 -0.92 -0.28 13.9 75 5 4 3 7 3 3 0   7 2.18 2.42 65.5 0.02 -0.08 6.9 77 1 3 2 12 3 3 0   8 2.42 2.98 65.3 -0.15 0.00 11.5 79 4 3 6 11 4 1 2   9 2.03 2.36 66.6 -0.14 0.00 14.4 74 5 5 2 8 5 1 1   10 2.06 2.21 67.2 -0.31 -0.06 11.3 81 4 6 8 8 3 1 2   11 1.90 2.07 70.6 0.51 0.02 9.7 74 5 2 2 12 3 2 2   12 1.27 1.39 71.4 0.40 0.05 6.2 74 1 4 4 12 5 4 2   13 2.39 2.88 72.2 -0.47 -0.08 9.7 81 6 2 3 8 4 2 0   14 1.42 1.66 76.9 1.06 0.31 5.4 74 4 2 5 20 4 2 2   15 2.29 2.34 83.2 0.00 0.04 14.2 83 5 9 7 26 5 1 1   16 2.03 2.38 86.1 -0.52 -0.10 16.8 72 10 7 1 13 7 0 3   17 2.11 2.13 90.0 -0.52 -0.37 6.2 84 2 3 7 9 2 3 0   18 2.08 2.60 94.3 -0.57 -0.13 10.2 78 9 3 7 11 5 4 0   19 2.05 2.37 99.4 0.45 0.23 9.7 77 4 4 2 17 5 1 1   20 2.07 2.44 100.5 -0.60 -0.36 6.0 81 5 3 12 9 3 5 0   21 1.24 1.24 102.9 -0.91 -0.33 16.2 73 5 7 5 9 7 1 1   22 1.68 1.85 107.9 -0.92 -0.32 16.0 79 7 8 8 6 4 2 0   23 1.45 1.57 112.5 -1.22 -0.58 14.1 86 8 14 26 21 2 2 0   24 1.59 1.85 114.6 -0.30 -0.08 10.1 80 8 2 8 9 4 2 2   25 2.09 2.16 114.3 -0.31 -0.11 12.5 78 8 8 8 27 7 1 4   26 2.31 2.50 130.7 0.11 -0.06 12.0 79 6 4 4 16 2 2 1   27 2.12 2.84 136.1 0.79 0.23 5.7 74 4 5 5 26 12 2 0   28 1.92 2.03 182.2 -0.65 -0.27 11.2 76 12 9 10 25 8 6 2   29 1.90 2.22 193.6 0.10 -0.01 9.1 76 11 7 13 37 9 4 4   30 2.21 2.30 205.4 -1.35 -0.48 14.6 79 12 10 14 8 6 5 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.