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PDBsum entry 5dfz
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Tunnel analysis for: 5dfz calculated with  MOLE 2.0
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PDB id
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5dfz
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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24 tunnels,
coloured by tunnel radius |
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24 tunnels,
coloured by
tunnel radius
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24 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.28 |
2.07 |
22.0 |
0.80 |
-0.10 |
3.8 |
92 |
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0 |
4 |
4 |
11 |
0 |
0 |
0 |
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2 |
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1.68 |
1.68 |
22.8 |
1.02 |
0.22 |
2.9 |
86 |
0 |
1 |
6 |
12 |
2 |
1 |
2 |
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3 |
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1.67 |
1.68 |
22.9 |
-0.18 |
-0.24 |
9.8 |
86 |
1 |
1 |
5 |
8 |
1 |
1 |
2 |
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4 |
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1.72 |
1.71 |
22.9 |
-1.49 |
-0.72 |
11.7 |
97 |
2 |
1 |
8 |
4 |
0 |
0 |
0 |
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5 |
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1.30 |
2.17 |
23.4 |
1.34 |
0.62 |
6.8 |
87 |
3 |
0 |
2 |
8 |
1 |
1 |
0 |
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6 |
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1.48 |
1.47 |
23.5 |
0.14 |
-0.18 |
7.7 |
76 |
1 |
2 |
4 |
10 |
2 |
0 |
2 |
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7 |
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1.66 |
1.67 |
24.1 |
1.91 |
0.43 |
1.4 |
83 |
0 |
0 |
3 |
14 |
1 |
1 |
2 |
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8 |
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1.80 |
1.82 |
24.5 |
-1.01 |
-0.75 |
8.5 |
92 |
2 |
2 |
7 |
10 |
0 |
1 |
0 |
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9 |
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1.69 |
1.69 |
24.6 |
-1.25 |
-0.71 |
10.4 |
87 |
3 |
0 |
5 |
6 |
1 |
0 |
0 |
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10 |
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1.32 |
2.21 |
25.8 |
0.85 |
0.22 |
6.6 |
98 |
1 |
2 |
6 |
6 |
2 |
1 |
0 |
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11 |
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1.27 |
2.09 |
28.3 |
1.61 |
0.25 |
1.7 |
88 |
0 |
0 |
3 |
15 |
1 |
3 |
0 |
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12 |
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1.28 |
2.12 |
32.9 |
1.16 |
0.28 |
4.2 |
96 |
1 |
0 |
8 |
11 |
1 |
1 |
0 |
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13 |
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1.70 |
1.69 |
35.1 |
-0.32 |
-0.34 |
8.2 |
87 |
4 |
1 |
5 |
9 |
0 |
2 |
0 |
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14 |
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1.72 |
1.70 |
35.4 |
0.24 |
-0.27 |
5.7 |
91 |
2 |
1 |
7 |
10 |
0 |
4 |
1 |
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15 |
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1.80 |
1.84 |
37.4 |
0.44 |
0.11 |
7.8 |
84 |
2 |
1 |
6 |
18 |
3 |
0 |
1 |
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16 |
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1.79 |
1.82 |
39.4 |
0.68 |
0.18 |
6.7 |
83 |
2 |
1 |
7 |
19 |
4 |
1 |
0 |
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17 |
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1.79 |
1.82 |
39.7 |
-0.49 |
-0.70 |
5.4 |
99 |
1 |
4 |
9 |
11 |
0 |
2 |
1 |
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18 |
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1.29 |
2.15 |
40.3 |
0.53 |
-0.02 |
7.0 |
91 |
3 |
1 |
3 |
14 |
1 |
1 |
0 |
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19 |
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1.26 |
2.07 |
41.6 |
0.22 |
-0.18 |
8.4 |
90 |
2 |
3 |
6 |
12 |
0 |
2 |
0 |
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20 |
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1.52 |
1.63 |
42.1 |
0.24 |
-0.06 |
7.4 |
87 |
2 |
1 |
11 |
12 |
1 |
0 |
0 |
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21 |
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1.64 |
1.64 |
44.2 |
-0.71 |
-0.66 |
5.9 |
92 |
1 |
4 |
13 |
11 |
2 |
4 |
0 |
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22 |
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1.30 |
2.16 |
44.4 |
0.34 |
0.03 |
6.3 |
86 |
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1 |
4 |
12 |
3 |
1 |
0 |
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23 |
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1.37 |
2.21 |
49.5 |
0.07 |
-0.18 |
9.7 |
88 |
3 |
2 |
5 |
13 |
0 |
1 |
0 |
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24 |
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1.51 |
1.75 |
61.2 |
0.83 |
0.02 |
2.1 |
84 |
1 |
2 |
11 |
20 |
5 |
4 |
4 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program