 |
PDBsum entry 5dft
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 5dft calculated with  MOLE 2.0
|
PDB id
|
|
|
|
5dft
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
7 pores,
coloured by radius |
|
7 pores,
coloured by radius
|
7 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.16 |
2.19 |
30.1 |
-0.81 |
-0.65 |
5.2 |
84 |
|
1 |
1 |
1 |
1 |
0 |
4 |
0 |
|
|
 |
|
2 |
 |
2.26 |
2.26 |
30.3 |
-0.74 |
-0.63 |
5.2 |
81 |
2 |
1 |
0 |
2 |
0 |
4 |
0 |
|
|
3 |
 |
2.11 |
2.28 |
31.0 |
-0.75 |
-0.61 |
4.4 |
83 |
1 |
1 |
1 |
2 |
0 |
5 |
0 |
|
|
4 |
 |
2.43 |
2.43 |
33.5 |
-2.27 |
-0.75 |
7.1 |
95 |
4 |
0 |
8 |
0 |
0 |
0 |
0 |
|
|
5 |
 |
2.06 |
2.44 |
38.9 |
-1.35 |
-0.66 |
4.7 |
92 |
1 |
1 |
8 |
1 |
0 |
3 |
0 |
|
|
6 |
 |
2.31 |
2.31 |
40.1 |
-1.53 |
-0.68 |
4.5 |
86 |
4 |
0 |
7 |
1 |
0 |
5 |
0 |
|
 |
7 |
 |
2.03 |
2.49 |
41.9 |
-1.68 |
-0.65 |
6.7 |
87 |
3 |
1 |
4 |
1 |
0 |
4 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program