PDBsum entry 5dbc Go to PDB code:  Pore analysis for: 5dbc calculated with MOLE 2.0 PDB id 5dbc Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.97 1.97 26.8 -1.00 -0.02 15.3 80 4 1 1 1 1 1 0  DT 6 P DG 7 P DC 8 P DG 9 P DA 10 P DT 7 T DC 8 T 2 1.88 1.93 28.9 -1.52 -0.23 22.5 81 6 2 2 1 3 0 0  DA 10 P DG 6 T DT 7 T DC 8 T DG 9 T DC 10 T 3 1.88 1.95 39.1 -0.38 0.25 14.8 79 5 1 1 2 3 0 0  DT 6 P DG 7 P DA 10 P DG 6 T DT 7 T DC 8 T DG 9 T DC 10 T 4 2.28 2.30 43.0 -1.63 -0.44 21.8 83 8 1 2 2 1 0 0  DC 5 T DG 6 T DT 7 T DC 8 T 5 2.25 2.28 51.8 -1.09 -0.29 15.3 82 5 1 2 2 2 0 0  DT 6 P DG 7 P DA 10 P DC 5 T DG 6 T DT 7 T DC 8 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.