PDBsum entry 5d7l Go to PDB code:  Tunnel analysis for: 5d7l calculated with MOLE 2.0 PDB id 5d7l Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.11 2.87 31.1 -0.17 -0.18 9.6 83 1 1 4 3 1 2 1   2 1.13 2.82 36.8 -0.23 -0.14 14.2 83 1 3 3 5 2 1 0   3 1.14 2.83 39.4 0.37 0.00 7.5 80 1 2 3 4 5 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.