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PDBsum entry 5d4h
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Tunnel analysis for: 5d4h calculated with  MOLE 2.0
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PDB id
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5d4h
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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3 tunnels,
coloured by tunnel radius |
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4 tunnels,
coloured by
tunnel radius
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4 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.51 |
2.30 |
28.8 |
-1.95 |
-0.67 |
20.3 |
87 |
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4 |
2 |
1 |
3 |
0 |
0 |
0 |
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GOL 508 A GOL 503 C
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2 |
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1.24 |
1.24 |
40.0 |
-1.30 |
-0.38 |
17.6 |
74 |
4 |
4 |
1 |
1 |
3 |
4 |
0 |
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3 |
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1.26 |
1.50 |
24.7 |
-0.68 |
-0.08 |
10.6 |
85 |
1 |
1 |
1 |
5 |
2 |
1 |
0 |
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4 |
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1.25 |
1.46 |
15.8 |
-1.11 |
-0.57 |
6.7 |
84 |
1 |
1 |
1 |
1 |
0 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program