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PDBsum entry 5d13

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protein ligands Protein-protein interface(s) links
Signaling protein/inhibitor PDB id
5d13

 

 

 

 

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Contents
Protein chains
100 a.a.
Ligands
56J-LYS-LYS-GLU-
THR-GLU-VAL
×4
56J-LYS
Waters ×58
PDB id:
5d13
Name: Signaling protein/inhibitor
Title: Third pdz domain (pdz3) of psd-95 complexed with cfmoc-kketev peptide
Structure: Disks large homolog 4. Chain: a, b, c, d. Fragment: unp residues 302-402. Synonym: postsynaptic density protein 95,psd-95,synapse-associated protein 90,sap90. Engineered: yes. Cfmoc-kketev peptide. Chain: g, e, h, f, i. Engineered: yes
Source: Rattus norvegicus. Norway rat. Organism_taxid: 10116. Gene: dlg4, dlgh4, psd95. Expressed in: escherichia coli. Expression_system_taxid: 562. Synthetic: yes. Synthetic construct. Organism_taxid: 32630
Resolution:
2.15Å     R-factor:   0.213     R-free:   0.257
Authors: S.De,M.R.Spaller,R.Olson
Key ref: A.Memic et al. Chemically-Modified peptides as inhibitors of pdz3 of. To be published, .
Date:
03-Aug-15     Release date:   17-Aug-16    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P31016  (DLG4_RAT) -  Disks large homolog 4 from Rattus norvegicus
Seq:
Struc:
 
Seq:
Struc:
724 a.a.
100 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 4 residue positions (black crosses)

 

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