PDBsum entry 5d0z Go to PDB code:  Pore analysis for: 5d0z calculated with MOLE 2.0 PDB id 5d0z Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.58 1.77 60.2 -2.48 -0.53 35.4 79 9 10 1 3 2 1 0   2 1.28 1.90 84.9 -1.82 -0.30 21.4 75 9 5 4 2 6 2 0   3 1.91 2.13 84.4 -1.15 -0.22 16.2 77 8 8 7 6 5 4 0   4 1.69 1.87 111.1 -1.54 -0.25 20.3 78 11 9 7 6 6 2 0   5 1.36 1.38 120.9 -2.27 -0.55 26.8 81 13 12 6 1 3 3 1   6 1.59 2.41 118.5 -1.72 -0.30 22.9 78 16 7 6 7 7 1 1   7 1.85 2.07 124.6 -1.10 -0.51 14.2 91 8 8 12 14 4 0 0  3BV 301 K 3BV 301 Y 8 1.85 2.01 135.0 -1.05 -0.37 15.4 89 8 8 11 11 4 1 2  3BV 301 K 3BV 301 V MES 302 V 3BV 201 b 9 1.64 1.65 141.4 -2.30 -0.38 28.1 81 23 8 9 9 6 2 0   10 1.74 2.24 146.2 -2.49 -0.46 30.5 79 19 11 6 5 3 2 0   11 1.20 1.16 151.6 -1.35 -0.22 19.4 77 17 5 8 8 9 3 0   12 1.67 1.98 151.4 -1.45 -0.40 16.8 85 13 7 12 12 6 0 1  3BV 301 K 13 1.85 2.06 150.3 -1.28 -0.46 15.5 89 9 8 13 11 4 1 2  3BV 301 V MES 302 V 3BV 301 Y 3BV 201 b 14 1.77 2.15 152.3 -1.22 -0.40 15.9 85 9 9 11 9 5 1 2  3BV 301 V MES 302 V 3BV 201 b 15 1.87 2.04 153.1 -1.20 -0.45 14.6 89 8 8 13 11 4 2 2  3BV 301 H MES 302 H 3BV 301 K 3BV 201 N 16 1.80 1.90 170.8 -1.35 -0.33 17.6 84 13 11 12 11 9 1 0  3BV 301 K 17 1.70 2.56 170.6 -2.00 -0.52 22.9 86 16 11 11 10 3 1 0  3BV 301 K 18 1.81 1.86 171.9 -1.45 -0.33 18.1 83 14 11 12 11 9 1 0  3BV 301 K 19 1.33 1.61 174.6 -1.81 -0.43 20.6 86 16 6 13 8 7 1 0  3BV 301 K 20 1.31 1.56 174.6 -1.85 -0.47 20.6 87 17 7 14 8 6 1 0  3BV 301 K 21 1.28 1.29 179.2 -1.16 -0.32 15.5 83 14 5 13 13 9 2 0  3BV 301 K 22 2.19 2.18 178.4 -1.42 -0.41 16.5 87 10 8 14 8 4 3 4  3BV 301 H MES 302 H 3BV 201 N 3BV 301 V MES 302 V 3BV 201 b 23 1.76 1.69 181.0 -1.90 -0.42 21.8 85 22 7 14 13 7 1 0  3BV 301 K 24 1.30 1.25 183.3 -1.72 -0.43 19.7 87 15 11 17 14 7 0 0  3BV 301 K 25 1.27 1.32 189.7 -1.12 -0.27 14.9 83 13 5 14 12 12 3 0  3BV 301 K 26 1.84 2.04 198.6 -1.31 -0.32 16.3 82 17 8 15 14 10 2 0  3BV 301 K 27 1.60 1.83 201.3 -1.59 -0.33 18.6 83 15 11 14 8 9 2 2  3BV 301 V MES 302 V 3BV 201 b 28 1.30 1.98 205.1 -2.06 -0.46 21.0 85 18 7 16 5 6 2 2  3BV 301 V MES 302 V 3BV 201 b 29 1.33 1.27 213.8 -1.92 -0.42 20.0 86 16 11 19 11 7 1 2  3BV 301 V MES 302 V 3BV 201 b 30 1.25 1.26 220.2 -1.32 -0.28 15.8 82 15 5 16 9 12 4 2  3BV 301 V MES 302 V 3BV 201 b Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.