PDBsum entry 5d0w Go to PDB code:  Pore analysis for: 5d0w calculated with MOLE 2.0 PDB id 5d0w Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.69 2.86 51.9 -1.01 -0.14 17.6 73 6 2 3 5 4 0 0   2 1.50 1.53 87.8 -2.28 -0.35 23.0 77 9 8 4 4 5 1 0   3 1.49 1.49 107.6 -0.96 -0.17 16.7 78 8 8 8 12 5 2 0   4 1.70 2.00 107.4 -1.28 -0.35 18.9 80 13 5 7 9 1 3 0   5 1.43 1.57 133.7 -0.95 -0.28 11.3 84 8 7 10 15 6 0 0  MES 302 K 6 1.22 1.21 147.2 -2.22 -0.45 23.6 80 20 12 11 7 7 0 0   7 1.77 2.16 155.2 -0.98 -0.14 14.2 79 12 8 12 12 7 2 0   8 1.25 1.19 167.1 -1.73 -0.38 21.8 82 17 13 15 11 7 0 0   9 1.29 1.42 171.6 -1.66 -0.26 20.0 79 19 11 14 13 7 2 0   10 1.23 1.20 171.7 -2.01 -0.39 23.0 83 25 10 18 11 6 1 0   11 1.21 1.15 178.0 -1.76 -0.37 21.1 81 21 13 13 12 7 2 0   12 1.25 1.19 185.5 -1.66 -0.41 19.2 84 18 10 15 14 5 0 0   13 1.25 1.19 187.9 -1.64 -0.39 18.3 84 17 11 16 14 5 0 0   14 1.41 1.58 190.1 -1.13 -0.21 12.9 79 11 7 15 15 10 2 0  MES 302 K 15 1.42 1.68 193.4 -1.50 -0.38 16.1 84 12 9 16 13 9 0 0  MES 302 K 16 1.43 1.45 195.8 -1.83 -0.46 18.5 82 16 7 12 13 6 1 0  MES 302 K 17 1.41 1.69 200.3 -1.13 -0.25 12.4 79 12 7 16 15 10 2 0  MES 302 K 18 1.42 1.44 201.9 -1.54 -0.39 14.8 82 15 7 15 14 9 1 1  MES 302 K 19 1.38 1.56 204.4 -1.70 -0.36 17.2 84 21 6 18 13 9 1 0  MES 302 K 20 1.45 1.56 203.9 -1.46 -0.38 15.2 83 13 9 16 15 9 0 0  MES 302 K 21 1.45 1.56 204.5 -1.43 -0.37 14.0 83 17 6 13 16 9 0 0  MES 302 K 22 1.89 1.79 212.7 -1.80 -0.30 19.7 79 21 9 14 7 9 2 0   23 1.46 1.47 217.3 -1.52 -0.36 15.8 82 18 8 14 15 9 2 0  MES 302 K 24 1.81 2.68 219.8 -1.83 -0.33 21.1 78 20 8 13 10 6 3 0   25 1.35 1.42 233.4 -1.75 -0.44 16.7 84 17 11 21 17 8 0 0  MES 302 K 26 1.69 1.93 241.3 -1.51 -0.25 17.8 79 22 9 16 12 9 4 0   27 1.32 1.26 247.5 -1.64 -0.29 18.4 81 20 11 21 14 8 2 0   28 1.35 1.42 249.1 -1.95 -0.43 20.2 83 24 11 20 13 7 1 1   29 1.19 1.12 251.1 -1.90 -0.42 20.7 84 22 13 21 14 7 0 0   30 1.19 1.12 251.7 -1.86 -0.40 19.5 84 26 10 18 15 7 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.