PDBsum entry 5d0t Go to PDB code:  Pore analysis for: 5d0t calculated with MOLE 2.0 PDB id 5d0t Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.72 1.93 106.1 -2.60 -0.51 28.9 82 15 8 7 2 5 0 0   2 1.40 1.43 106.7 -1.79 -0.42 23.3 76 11 12 6 5 5 5 0   3 1.23 1.25 126.6 -2.09 -0.45 22.4 84 11 10 12 7 5 0 0   4 1.75 1.94 127.2 -1.78 -0.32 21.7 79 13 10 9 5 8 1 0   5 1.24 1.23 135.9 -2.26 -0.41 27.4 83 17 10 10 7 6 1 0   6 1.71 1.71 132.3 -1.74 -0.31 18.9 78 13 9 10 7 6 3 0   7 1.58 1.77 136.8 -1.30 -0.22 18.3 78 17 7 7 12 6 3 0   8 1.68 1.97 146.6 -1.92 -0.37 21.7 84 16 10 12 7 5 2 0   9 1.27 1.27 150.9 -1.74 -0.29 23.4 81 16 14 11 10 8 1 0   10 1.20 1.21 155.5 -1.67 -0.29 20.0 80 16 11 13 13 6 3 0   11 1.71 1.97 156.4 -2.22 -0.43 25.2 83 15 12 12 7 6 0 0   12 1.27 1.32 180.1 -2.08 -0.38 25.8 84 18 16 13 12 6 0 0   13 1.24 2.62 180.9 -1.82 -0.24 20.4 76 18 10 13 9 11 5 0   14 1.27 1.40 191.1 -1.68 -0.33 19.3 78 20 11 14 7 9 4 0   15 1.17 1.14 200.7 -1.56 -0.30 19.9 80 23 14 15 12 9 4 0   16 1.72 1.99 201.1 -2.39 -0.58 21.0 86 16 9 16 4 4 0 0   17 1.34 1.54 210.0 -2.54 -0.57 22.8 85 18 7 17 4 6 1 0   18 1.56 1.76 209.5 -1.85 -0.42 18.6 85 22 6 12 8 6 0 0   19 1.71 1.70 211.5 -1.85 -0.38 17.1 81 17 8 16 8 7 3 0   20 1.65 1.67 215.8 -1.99 -0.32 21.7 79 22 8 14 7 10 3 0   21 1.27 1.30 221.5 -2.19 -0.49 22.1 87 19 13 17 9 4 0 0   22 1.26 1.30 221.2 -2.16 -0.49 21.6 87 20 12 19 10 4 0 0   23 1.59 1.59 229.6 -1.45 -0.23 17.0 78 18 10 15 10 12 4 0   24 1.19 1.15 229.9 -1.80 -0.38 20.4 85 24 10 13 13 6 0 0   25 1.22 1.19 230.4 -2.33 -0.50 23.7 86 21 11 18 9 6 1 0   26 1.29 1.23 238.2 -1.79 -0.35 18.5 82 20 12 19 14 7 3 0   27 1.28 1.20 241.6 -2.02 -0.43 22.0 87 22 16 20 15 4 0 0   28 1.60 4.29 248.8 -1.65 -0.29 17.5 81 20 10 18 12 9 5 0   29 1.23 2.61 249.6 -2.28 -0.44 21.9 82 21 10 19 6 9 2 0   30 1.23 2.62 270.0 -2.18 -0.41 22.8 83 24 14 20 11 9 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.