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PDBsum entry 5czi

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protein ligands links
Transferase PDB id
5czi

 

 

 

 

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Contents
Protein chain
310 a.a.
Ligands
ASP-HIS-GLN-TYR-
PTR-ASN-ASP
Waters ×129
PDB id:
5czi
Name: Transferase
Title: Egfr l858r mutant in complex with a shc peptide substrate
Structure: Epidermal growth factor receptor. Chain: a. Fragment: egfr unp residues 694-1022. Synonym: proto-oncogenE C-erbb-1,receptor tyrosine-protein kinase erbb-1. Engineered: yes. Mutation: yes. Shc peptide substrate. Chain: b.
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: egfr, erbb, erbb1, her1. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108. Synthetic: yes. Escherichia coli h489. Organism_taxid: 656404.
Resolution:
2.60Å     R-factor:   0.185     R-free:   0.225
Authors: C.H.Yun,M.J.Eck
Key ref: M.J.Begley et al. (2015). EGF-receptor specificity for phosphotyrosine-primed substrates provides signal integration with Src. Nat Struct Biol, 22, 983-990. PubMed id: 26551075 DOI: 10.1038/nsmb.3117
Date:
31-Jul-15     Release date:   30-Sep-15    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
P00533  (EGFR_HUMAN) -  Epidermal growth factor receptor from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1210 a.a.
310 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 2 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.2.7.10.1  - receptor protein-tyrosine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H+
L-tyrosyl-[protein]
+ ATP
= O-phospho-L-tyrosyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
DOI no: 10.1038/nsmb.3117 Nat Struct Biol 22:983-990 (2015)
PubMed id: 26551075  
 
 
EGF-receptor specificity for phosphotyrosine-primed substrates provides signal integration with Src.
M.J.Begley, C.H.Yun, C.A.Gewinner, J.M.Asara, J.L.Johnson, A.J.Coyle, M.J.Eck, I.Apostolou, L.C.Cantley.
 
  ABSTRACT  
 
Aberrant activation of the EGF receptor (EGFR) contributes to many human cancers by activating the Ras-MAPK pathway and other pathways. EGFR signaling is augmented by Src-family kinases, but the mechanism is poorly understood. Here, we show that human EGFR preferentially phosphorylates peptide substrates that are primed by a prior phosphorylation. Using peptides based on the sequence of the adaptor protein Shc1, we show that Src mediates the priming phosphorylation, thus promoting subsequent phosphorylation by EGFR. Importantly, the doubly phosphorylated Shc1 peptide binds more tightly than singly phosphorylated peptide to the Ras activator Grb2; this binding is a key step in activating the Ras-MAPK pathway. Finally, a crystal structure of EGFR in complex with a primed Shc1 peptide reveals the structural basis for EGFR substrate specificity. These results provide a molecular explanation for the integration of Src and EGFR signaling with downstream effectors such as Ras.
 

 

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