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PDBsum entry 5cz6

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 5cz6 calculated with MOLE 2.0 PDB id
5cz6
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.13 2.15 25.7 -0.69 -0.33 13.2 70 3 3 1 2 2 0 0  
2 1.61 1.69 98.3 -1.79 -0.28 24.4 79 13 8 7 6 8 2 0  
3 1.59 2.69 116.9 -1.81 -0.30 23.8 76 14 9 7 5 7 1 0  
4 1.59 1.63 115.8 -1.86 -0.32 24.4 78 14 9 6 4 7 1 0  
5 1.87 2.84 116.9 -2.87 -0.56 31.1 78 17 10 6 2 4 1 0  
6 1.58 1.80 124.6 -1.22 -0.21 19.3 79 14 8 6 9 7 1 0  
7 1.82 2.01 132.7 -2.74 -0.56 31.6 80 18 10 7 3 4 2 0  
8 1.62 2.40 137.8 -2.05 -0.38 23.9 80 22 8 7 6 8 3 0  
9 1.62 1.72 141.3 -2.07 -0.39 26.5 78 15 12 7 5 8 2 0  
10 1.62 1.71 146.4 -1.53 -0.27 19.8 78 17 9 8 8 11 3 0  
11 1.56 1.63 153.6 -0.93 -0.12 14.6 77 11 7 12 11 13 3 0  
12 1.78 1.97 160.7 -1.73 -0.26 21.6 78 20 9 11 9 12 3 0  
13 1.19 1.20 164.3 -1.79 -0.42 16.5 80 17 7 12 5 11 0 0  
14 1.74 2.66 171.7 -1.87 -0.30 23.4 75 21 11 7 7 8 3 0  
15 1.55 1.84 172.7 -1.67 -0.24 22.0 79 25 9 13 11 10 3 0  
16 1.20 1.21 173.3 -1.63 -0.36 17.5 80 18 7 15 6 12 1 0  
17 1.13 1.13 181.9 -1.22 -0.27 14.3 78 13 8 16 8 15 1 0  
18 1.83 2.09 195.8 -2.61 -0.50 26.4 82 25 8 10 3 8 1 0  
19 1.76 2.05 202.2 -2.46 -0.42 27.4 83 26 8 12 4 10 1 0  
20 1.96 2.11 200.7 -2.73 -0.56 25.6 82 25 9 9 2 7 0 0  
21 1.56 1.62 210.7 -1.94 -0.32 22.5 81 21 9 13 6 13 1 0  
22 1.90 2.89 210.8 -2.83 -0.61 27.6 83 23 11 11 3 4 1 0  
23 1.58 1.63 215.6 -2.07 -0.39 22.0 80 21 10 11 5 12 1 0  
24 1.69 3.18 216.5 -2.65 -0.52 28.2 82 25 11 13 5 6 2 0  
25 1.70 2.50 215.9 -2.23 -0.47 21.6 82 25 8 12 6 7 2 0  
26 1.67 1.77 220.3 -1.89 -0.33 22.0 80 22 10 14 7 13 2 0  
27 1.61 1.70 225.1 -2.14 -0.42 23.9 80 20 12 14 7 9 2 0  
28 1.62 1.66 228.9 -1.44 -0.22 18.4 79 17 11 14 9 16 2 0  
29 1.77 1.89 250.4 -1.74 -0.30 18.4 80 23 8 16 8 13 2 0  
30 1.64 2.61 275.4 -1.46 -0.21 18.2 77 22 11 15 10 16 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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