 |
PDBsum entry 5ctr
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 5ctr calculated with  MOLE 2.0
|
PDB id
|
|
|
|
5ctr
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
9 pores,
coloured by radius |
|
9 pores,
coloured by radius
|
9 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.27 |
1.93 |
34.9 |
-1.46 |
-0.36 |
13.1 |
79 |
|
3 |
1 |
4 |
3 |
2 |
0 |
0 |
|
|
 |
|
2 |
 |
1.17 |
1.23 |
57.8 |
-1.09 |
-0.30 |
16.8 |
81 |
6 |
2 |
5 |
7 |
1 |
0 |
0 |
|
|
3 |
 |
1.82 |
2.35 |
60.1 |
-1.80 |
-0.29 |
27.4 |
81 |
10 |
5 |
3 |
5 |
1 |
0 |
0 |
|
|
4 |
 |
1.28 |
2.55 |
63.1 |
0.01 |
0.25 |
10.6 |
72 |
6 |
2 |
3 |
7 |
6 |
0 |
0 |
|
|
5 |
 |
2.48 |
3.06 |
64.6 |
-1.03 |
-0.11 |
19.7 |
79 |
8 |
4 |
4 |
5 |
4 |
0 |
0 |
|
|
6 |
 |
1.28 |
1.93 |
66.4 |
-0.71 |
0.02 |
15.0 |
76 |
6 |
4 |
4 |
6 |
4 |
0 |
0 |
|
|
7 |
 |
1.16 |
1.21 |
75.0 |
-1.13 |
-0.06 |
20.0 |
76 |
7 |
5 |
5 |
9 |
2 |
0 |
0 |
|
|
8 |
 |
1.27 |
2.54 |
86.9 |
0.08 |
0.16 |
8.6 |
75 |
6 |
2 |
6 |
12 |
6 |
0 |
0 |
|
 |
9 |
 |
1.23 |
2.42 |
188.0 |
-0.66 |
0.11 |
19.8 |
80 |
12 |
13 |
9 |
22 |
5 |
1 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program