PDBsum entry 5cpk Go to PDB code:  Pore analysis for: 5cpk calculated with MOLE 2.0 PDB id 5cpk Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.64 2.74 34.0 -2.71 -0.45 31.7 75 5 0 0 0 1 0 0  DT 28 I DG 29 I DG 30 I DA 31 I DA 32 I DT 33 I DT 105 I DA 38 J DT 114 J DT 115 J 2 2.21 2.21 35.0 -1.05 -0.85 6.0 97 1 0 3 0 0 0 0  DA 26 I DT 92 I 5CM 93 I DA 95 I DT 102 I DC 103 I DA 104 I DT 105 I DT 45 J DT 46 J DA 47 J DC 48 J DA 49 J DT 50 J 3 2.67 2.67 38.7 -1.18 -0.79 14.1 76 3 2 0 0 0 0 0  DG 29 I DG 30 I DA 31 I DA 32 I DT 33 I DT 36 I DT 37 I DG 38 I DT 113 I DG 114 I DA 28 J DG 37 J DA 38 J DA 113 J DT 114 J DT 115 J 4 1.57 2.03 39.1 -1.64 -0.74 16.3 91 2 1 1 0 0 0 0  DA 26 I DG 98 I DT 99 I DA 100 I DA 101 I DT 102 I DC 103 I DA 104 I DT 105 I DT 45 J DT 46 J DA 47 J DC 48 J DA 49 J DT 50 J DT 51 J 5 2.21 2.21 39.2 -1.53 -0.65 15.7 85 2 0 2 1 0 0 0  DA 26 I DT 102 I DC 103 I DA 104 I DT 105 I DA 38 J DT 45 J DT 46 J DA 47 J DC 48 J 6 3.51 3.51 49.2 -1.34 -0.52 17.3 73 4 1 1 2 1 0 0  DG 38 I DC 47 I DA 48 I DG 114 I DG 115 I DT 123 I DG 124 I DG 27 J DA 28 J DT 102 J DC 103 J DC 104 J 7 3.12 3.12 53.2 -1.44 -0.66 13.6 93 3 0 7 2 1 0 0  DT 18 I DT 92 I DT 102 I DC 103 I DT 105 I DA 38 J DT 123 J 8 1.58 1.58 57.7 -1.20 -0.58 15.9 81 4 1 2 1 0 0 0  DT 18 I DT 91 I DT 92 I DG 98 I DT 99 I DT 50 J DT 51 J 5CM 52 J DG 53 J 9 1.58 1.96 83.8 -2.77 -0.64 32.5 81 7 1 1 0 0 0 0  DT 28 I DT 99 I DA 100 I DT 102 I DC 103 I DT 105 I DA 38 J DT 42 J DT 51 J 10 2.35 2.42 90.5 -1.31 -0.71 14.5 87 5 3 6 2 0 1 0  DC 47 I DA 48 I DT 58 I DT 59 I 5CM 60 I DG 61 I DT 123 I DG 124 I DG 133 I DA 134 I DT 7 J DC 8 J DA 18 J DT 25 J DG 27 J DT 83 J DA 89 J DA 90 J DT 92 J DC 103 J DC 104 J 11 2.04 3.06 94.6 -1.61 -0.37 16.8 81 8 3 10 5 7 0 0  DT 18 I DC 47 I DA 48 I DT 92 I DT 123 I DG 124 I DG 27 J DT 102 J DC 103 J DC 104 J DT 123 J Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.